Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2331 ATGGCGCCAACGCTGAACCTTGCCGCCGTCGGAGTTCCTCTCCGTTTCTCTTCCTCCGTCGATCGCTCCTTCAGATTTCCTCGCCGGACCTCGGTCCGCGCCGTCGCGGTTGAGGCTGTGGAGACGCGGCCGGCGGCGGCGAGCCTCTACGAGGTGCTGCGAGTCGAGCGAGACGCGTCGCCGACGGAGATAAAGTCGGCGTACCGGAGCCTCGCAAAGCTCTACCATCCTGACTCGGCGGTGCGACGTTCGCCGGAGACCAACGGCGACGGAAACTTCATTCAGCTCCGAAATGCGTACGAGACGCTGTCAGATCCGTCGGCGAGGGCGATATACGATATGAAGTTGACGGCGGCGTGCGGCGGAATACTCCGGCGGTATGCGGCTCCGCTTAGTCGTAACCACTCGTCGGCGTTTTACACGACACGAAGGTGGGAGACGGACCAATGCTGGTAG 456 0.6294 MAPTLNLAAVGVPLRFSSSVDRSFRFPRRTSVRAVAVEAVETRPAAASLYEVLRVERDASPTEIKSAYRSLAKLYHPDSAVRRSPETNGDGNFIQLRNAYETLSDPSARAIYDMKLTAACGGILRRYAAPLSRNHSSAFYTTRRWETDQCW 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2331 151 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 1 151 - -
Aed4g2331 151 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
Aed4g2331 151 PRINTS DnaJ domain signature 68 83 IPR001623 -
Aed4g2331 151 PRINTS DnaJ domain signature 88 108 IPR001623 -
Aed4g2331 151 PRINTS DnaJ domain signature 50 68 IPR001623 -
Aed4g2331 151 CDD DnaJ 50 105 IPR001623 -
Aed4g2331 151 Gene3D DnaJ domain 35 122 IPR036869 -
Aed4g2331 151 ProSiteProfiles dnaJ domain profile. 48 116 IPR001623 -
Aed4g2331 151 Pfam DnaJ domain 49 113 IPR001623 -
Aed4g2331 151 SUPERFAMILY Chaperone J-domain 46 124 IPR036869 -
Aed4g2331 151 SMART dnaj_3 47 108 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2331 Aed-Chr4 25758399 25758854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2331 39 113 C2H2 Transcription Factor Family AT1G74250 41.558 2.04e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2331 - - gmx:100778445 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2331 4 25758399 25758854 Aed3g2618 3 28120544 28120978 PCT