Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2330 ATGGAGACTCCAATTGAAGTGAAACCTACTCGTGTTGCATCCGGATTCTTAGATGACTTGTCTGAGACTTGCAAGATGGGTACTACTCCAAATGGAAGAGCAATGCATAAGTCCAATGATGAAGTTCTGTTTGACTCCGAAATAAATTTTCACCAGTCAGAATCTAGTCAGGTGAATGTACGTGGATCCCATTCTGCAGAATCTCGGACAGTTCATTATGAAACGTTGGCAGCTATTATTTTCAGGAGCATACAAGTTGTAGTTTTCTCTAACAAACTTAACTTGCTTATGCCTTTTGGACCTCTTGCAATTCTTGTGCAGAAGTTGACTAGTCATTTTGGTTGGGTCTTTGGTCTGAGTTTGTTGGGTATAATGCCTCTGGCGGAGCGGTTAGGCTATGCTACCGAGCAGCTAGCATTTTACACCGGAGATACTGTTGGGGGTCTTTTAAATGCCACATTTGGAAATGCAACAGAATTGATCATCTCAATATATGCACTGAAAAGTGGAATGACACGGGTTGTCCAGCTCTCTTTGCTGGGTTCAATTTTGTCCAATATGTTACTTGTGCTTGGATGTGCATTCTTATGTGGTGGGATTGTTAATCATCAGAAGGAACAAGTGTTTAACAAGGCAGCTGCTTCTGTGAACTCAGGATTATTGCTGATGGCAGTCATGGGCATACTTTTTCCTGCTGTTCTACACTACACACACACTGAGGTCCATGCTGGCAAGTCAGAGTTGTCACTTTCAAGATTCAGCAGCTGCATCATGCTTGTGGCCTATGTTGCATACCTATTTTTTCAGTTAAGAAGTCAAAGAAGTCTCTATGTCTCTGTGAATGAGGTTGGCAGTCTAATATCAAACTTCCTTTTTGTTTCCTCAGTCATTCTTTTGTTTGTGGATATGTCATATGTGGAAGAGGATCAGAATGGAAACAACTCAAATGACGATGAATCTCCAGATATTTCCAAATGGGAATCAATAATCTGGCTTTTGGTTATGACTGCTTGGATATCAATCCTGTCAGAATACTTGGTTGGCGCTATAGAGGGAGCATCTACTGCATGGGAAATTCCAGTAGCATTTATCAGTGTGATATTGCTTCCACTAGTGGGGAATGCAGCTGAACATGCCAGTGCTATAATGTTTGCCATGAAAGATAAACTTGACATTTCCTTAGGAGTAGCAATTGGGTCATCCACGCAGATTTCTATGTTTGTGATACCATTTTGTGTTGTTATTGGCTGGATAATTGGGCACCCTATGGACTTAAACTTTCAACTTTTTGAGACTGCAGCACTATTTCTTACGGTTATAGTCGTAGCCTTCATGTTACAGGAAGGAACTGCTAATCACTTCAAAGGACTAATGCTTATTCTTTGCTATCTGATAGTGGCAGCCAGTTTTTATGTACATGTAGATTCTACTCAATAA 1437 0.4071 METPIEVKPTRVASGFLDDLSETCKMGTTPNGRAMHKSNDEVLFDSEINFHQSESSQVNVRGSHSAESRTVHYETLAAIIFRSIQVVVFSNKLNLLMPFGPLAILVQKLTSHFGWVFGLSLLGIMPLAERLGYATEQLAFYTGDTVGGLLNATFGNATELIISIYALKSGMTRVVQLSLLGSILSNMLLVLGCAFLCGGIVNHQKEQVFNKAAASVNSGLLLMAVMGILFPAVLHYTHTEVHAGKSELSLSRFSSCIMLVAYVAYLFFQLRSQRSLYVSVNEVGSLISNFLFVSSVILLFVDMSYVEEDQNGNNSNDDESPDISKWESIIWLLVMTAWISILSEYLVGAIEGASTAWEIPVAFISVILLPLVGNAAEHASAIMFAMKDKLDISLGVAIGSSTQISMFVIPFCVVIGWIIGHPMDLNFQLFETAALFLTVIVVAFMLQEGTANHFKGLMLILCYLIVAASFYVHVDSTQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2330 478 Gene3D - 142 276 IPR044880 -
Aed4g2330 478 Gene3D - 277 472 IPR044880 -
Aed4g2330 478 Pfam Sodium/calcium exchanger protein 328 469 IPR004837 GO:0016021|GO:0055085
Aed4g2330 478 Pfam Sodium/calcium exchanger protein 114 270 IPR004837 GO:0016021|GO:0055085
Aed4g2330 478 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 31 477 - -
Aed4g2330 478 TIGRFAM cax: calcium/proton exchanger 97 471 IPR004798 GO:0006816|GO:0015369
Aed4g2330 478 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 31 477 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2330 Aed-Chr4 25740294 25746898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2330 36 478 Antiporters AT1G55730 67.946 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2330 K07300 - gmx:100799276 812.757