Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2290 ATGGCATCCATTGCCACCGTCTTCAACAAGTTCCTCTACCTCCTCATCCTCTTAGTCCACCTCGGCTGCTTCATCTTCACCACCGCCGGAAAACAATCTCCGCCGTCAAAGAAACGCAAAATCTCACCTTCCTCCCCTTCCCACCCCAAATTCAAAACCCACAAAGCCCTCTCCACTTCTTGGCATTTCATCAAACACCTCTTCTCCACCAAGTCCTGCAAAAACCCTGCCACCGCCGCCGCCCAATCCTCCCCTCAATCCACCGCCACCTCCACCACCGTCTCCGCCGACACCGCAACACATTCCCTAAGAGCCACCCAACAATCACTCATTTCATTGACACAGCCCGACCCGGATAGAAAACAACCTGTTCCGTGCCCCGAATCCGACATCTCCGCCGACACCAACCTCTTCTTCCCTCTCCGCAACGACATCTTCCCCTGCACCGCGTGCGGCGAGATTTTCCAAAAGCCCCACCTCTTAGAAACCCACCAAACCCTCAAACACGCGGTTTCGGATCTATCCGGATCCGACCCGGGGCGCAACATCGTCCAGATCATCTTTAAATCGGGTTGGCCCGAATCCAAAGCCTTCCCCACCATAACCCGCATCCTCAAGATCCACAACAGCCCCAAGATCCTCTCAAAATTCGAGGAGTACCGCGAGGCCGTCAAGTCCAAGGCGGCGCGTCATGGCGCCCTCACGCGCCGCCGCAACGAGCGCTGCATCGCCGACGGTAACGAGCTCATGCGCTTCCATTGCTCCACCTTCCTATGCGACTTGGGACACAATGGGGATTCCGCGATTTGTGCGCAGCAATTTTGTAACATTTGTGGAATCATCAAGTCCGGGTTTTCCCCTAAACTCGACGGGATCGCCACGCTGTCCACCAGTTGGCGGGCACACGTGGCGATTCCCGAAGACATGGAGCGAGAGTTCCGCTTCATGAACGTGAAGCGGGCCATGCTAGTTTGTCGGGTGATAGCGGGTCGGGTTGGATCGGATTCGGACGAAGCAGAAAAAGAGGACGGAGGGTTTGATTCGGTGATGGCGAGGGGAGAGACTGGGGTTTACACCCGGCTTGATGAGGAGGAGCTTTTGGTGTTTAATCCTAGGGCTGTGCTTCCTTGCTTTGTGATTGTGTATAGTGTGTGA 1155 0.5567 MASIATVFNKFLYLLILLVHLGCFIFTTAGKQSPPSKKRKISPSSPSHPKFKTHKALSTSWHFIKHLFSTKSCKNPATAAAQSSPQSTATSTTVSADTATHSLRATQQSLISLTQPDPDRKQPVPCPESDISADTNLFFPLRNDIFPCTACGEIFQKPHLLETHQTLKHAVSDLSGSDPGRNIVQIIFKSGWPESKAFPTITRILKIHNSPKILSKFEEYREAVKSKAARHGALTRRRNERCIADGNELMRFHCSTFLCDLGHNGDSAICAQQFCNICGIIKSGFSPKLDGIATLSTSWRAHVAIPEDMEREFRFMNVKRAMLVCRVIAGRVGSDSDEAEKEDGGFDSVMARGETGVYTRLDEEELLVFNPRAVLPCFVIVYSV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2290 384 Gene3D - 170 383 - -
Aed4g2290 384 SUPERFAMILY ADP-ribosylation 173 383 - -
Aed4g2290 384 ProSiteProfiles Zinc finger C2H2 type domain profile. 146 170 IPR013087 -
Aed4g2290 384 MobiDBLite consensus disorder prediction 30 53 - -
Aed4g2290 384 PANTHER NUCLEIC ACID BINDING PROTEIN 3 383 - -
Aed4g2290 384 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 383 - -
Aed4g2290 384 ProSitePatterns Zinc finger C2H2 type domain signature. 148 169 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2290 Aed-Chr4 25437376 25438530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2290 61 384 C2H2 Transcription Factor Family AT2G29660 54.354 1.68e-111 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed4g2290 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2290 - - gmx:100785244 638.262