Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2288 ATGGTGGAAATGGATACAGTCCCTCTTCTCTTCACTCTAGCTGCTTTTCTATCCGCATATTTCCTTTGGTTCCACCTCTTGGCTCGAACCCTAACTGGTCCAAAAGTATGGCCCTTGGTTGGCAGCCTTCCAAGCATGATCATAAACCGCAACCGGGTTCACGACTGGATGGCTGCCAACCTTCGCCAGACCGGGGGCTCAGCCACTTACCAAACCTGCAACATTACCATCCCTTTCTTCGCCCGCAAGCAGGGCTTCTTTACCATCACTAGCAATCCCAAAAACATCGAACACATCCTCCGAACCCGGTTCGACAACTACCCCAAGGGACCGCACTGGCAGGCCGCGTTCCACGACCTCCTAGGCCATGGAATTTTCAACAGCGACGGCGACACGTGGCTCTTGCAACGTAAAACCGCGGCTCTAGAATTCACCACCCGAACCCTAAGACAAGCCATGGCTCGCTGGGTGAACCGGACAATAAAAAACCGGCTATGGTGCATTTTGGATAAAGCTGTTAAAGAAAACGTCTCGGTTGATATGCAGGACCTTCTTTTGCGTTTAACTTTCGATAACATTTGTGGACTCACCTTCGGTAAGGACCCCGAAACTCTCTCGCCGGATCTACCCGAAAACCCCTTCACTGCTGCCTTTGACACTGCCACAGAAATCACCTTGCAAAGGCTTCTGTACCCTAGCATAATATGGAGATTCGAGAAGCTTCTTGGCATCGGTAAGGAGAAGAAAATGGAGCAGAGTTTGAAGATCGTTGAAGCTTACATGAGCGACGCCGTTTCAGCTCGCGAGAAATCGCCTTCCGACGACTTGCTATCAAGGTTCATAAAGAAGCGCGACGGAGCCAGGAAGCCGCCGAGCGCCGCCTCACTGAGTCAGATCGCGCTGAACTTCCTTCTAGCCGGCAGGGACACGTCGTCGGTGGCGCTCAGCTGGTTCTTCTGGCTCGTCATGAACCACCCCACCGTGGAGGAGAAGATCCTCGCCGAGTTAACAGCGGTACTCACTTCCACTCGCGGCGGCGACCGGCGGCTCTGGACTGAGGAGGCGGTGGACTTCGAAGAAGCGGAGAAGCTGGTTTACCTGAAAGCAGCATTAGCCGAGACTCTACGTCTGTACCCGTCGGTGCCGGAGGATTTCAAGCATGCAGTCTCCGACGATGTCTTGCCGGACGGTACGGTGGTTCCAGCGGGTTCAACAGTGACGTATTCGATTTACGCTGTGGGGAGAATGAAGAGCGTGTGGGGCGAGGATTGCATGGAGTTTAAACCGGAGCGGTTTTTATCGGTACAGGGAGACCGGTTCGAACCGCCAAATGACGGTTACAAGTTCGTTGCGTTCAACGCTGGACCGAGAAGTTGTTTGGGGAAGGACTTGGCTTATCTGCAGATGAAGTCTGTGGCTTCCGCTGTGCTTCTGCGTTACCGGCTGTCGCCGGTTCCCGGTCACCGGGTGCAGCAGAAGATGTCTCTCACTCTCTTCATGAAGCATGGGCTCCGCGTGTTCTTACAGCCACGTCAGCTTCAACCGCAGGCTGCCACGTCTGCATAG 1566 0.5415 MVEMDTVPLLFTLAAFLSAYFLWFHLLARTLTGPKVWPLVGSLPSMIINRNRVHDWMAANLRQTGGSATYQTCNITIPFFARKQGFFTITSNPKNIEHILRTRFDNYPKGPHWQAAFHDLLGHGIFNSDGDTWLLQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAVKENVSVDMQDLLLRLTFDNICGLTFGKDPETLSPDLPENPFTAAFDTATEITLQRLLYPSIIWRFEKLLGIGKEKKMEQSLKIVEAYMSDAVSAREKSPSDDLLSRFIKKRDGARKPPSAASLSQIALNFLLAGRDTSSVALSWFFWLVMNHPTVEEKILAELTAVLTSTRGGDRRLWTEEAVDFEEAEKLVYLKAALAETLRLYPSVPEDFKHAVSDDVLPDGTVVPAGSTVTYSIYAVGRMKSVWGEDCMEFKPERFLSVQGDRFEPPNDGYKFVAFNAGPRSCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVQQKMSLTLFMKHGLRVFLQPRQLQPQAATSA 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2288 521 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 5 513 - -
Aed4g2288 521 PANTHER CYTOCHROME P450 5 513 - -
Aed4g2288 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 SUPERFAMILY Cytochrome P450 23 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 Pfam Cytochrome P450 87 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2288 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Aed4g2288 521 Gene3D Cytochrome P450 27 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2288 Aed-Chr4 25420981 25423258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2288 1 511 Cytochrome P450 AT5G58860 72.016 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2288 K15401 - gmx:100787559 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2288 4 25420981 25423258 Aed3g1834 3 22776175 22777907 PCT