Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2269 ATGAAGAAAACACCAGGCCCCAGTTTGCATCAGTCTAACCAAAGAAAAAAGAATGTTGTTGGATTCCAAGATAGAGGTGCAGGCAGTGCAACACAGATGCAAAATGTTGAGAACCATTCCGCTTTGACATATTTCAAGTCTTCCTTCAAGAAATTTTTTACACTGTTTCTCTCTGGGAAGAGAGAAGCTGCTGAAAATAATGACAGAAAGAATACACACAAAGTTAGAGGGGTATCATCTTCCACAGATGTATCATCTGATAGTTCAAAGAATTCATCAAAATTGGTGTTTTCTCATTCCTCTGCATCATCTGGCTCTGCAAGTAGCCAGCTTGGAATGGGAAACTTCACCTTTGATGAAATTTACAAGGCAACATCAAAGTTCTCTCTAGATAATAGGATTGGGGAAGGCGCGTTTGGAACAGTGTATAAGGGAAGGCTTAGTGATGGATCCCTTGTGGCTGTAAAGCGTGCCAAGAAGGATTTACTAAACAAGTACTTGGCTGAGTTCAAGAATGAAATAAACACCTTGTCAAAAATTGAGCACATTAACCTTGTAAGGTGGTATGGATATTTGGAGCATAGATATGAAAAGATCATTGTCGTTGAATATGTTAATAATGGAACTCTTCGGGAACATTTAGATGGTAATCGGGGAGATGGATTAGAAATTGGTGAGCGTCTAGACATAGCAATTGATATAGCTCATGCAATTACTTACCTTCATATGTACACAGATCATCCAATTATTCACAGAGACATCAAAGCATCAAATATCTTAATCACTGATAAACTAAGGGCCAAAGCAATGCAGTTGTTGAAACAAAGAGAGGTTGTGATTGCCATGGATCCGAGACTGAGAAGAAATCAAGCCTCAAACAAGGCAGTGCATAAGGTTCTGAAGCTAGCTTTCCAATGCCTTGCTCCGATGAGACGATCACGGCCATCTATGAAGAGTTGTGCAGAGGTTCTATGGGAGATCCGTAAAGATTTTAGGGAAAAAGCATTTTCTCATCCTCCACATGGTCCTCACCATTCTGCAGATTTCCCTAGAAGAGATGCTAGGAAGAATAGGCATAAGACATATGGTATTGAAGATGGTAAAGCCTATAAACTTGTATCTGCTTAA 1128 0.3963 MKKTPGPSLHQSNQRKKNVVGFQDRGAGSATQMQNVENHSALTYFKSSFKKFFTLFLSGKREAAENNDRKNTHKVRGVSSSTDVSSDSSKNSSKLVFSHSSASSGSASSQLGMGNFTFDEIYKATSKFSLDNRIGEGAFGTVYKGRLSDGSLVAVKRAKKDLLNKYLAEFKNEINTLSKIEHINLVRWYGYLEHRYEKIIVVEYVNNGTLREHLDGNRGDGLEIGERLDIAIDIAHAITYLHMYTDHPIIHRDIKASNILITDKLRAKAMQLLKQREVVIAMDPRLRRNQASNKAVHKVLKLAFQCLAPMRRSRPSMKSCAEVLWEIRKDFREKAFSHPPHGPHHSADFPRRDARKNRHKTYGIEDGKAYKLVSA 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2269 375 MobiDBLite consensus disorder prediction 63 93 - -
Aed4g2269 375 Gene3D Transferase(Phosphotransferase) domain 1 205 272 - -
Aed4g2269 375 Gene3D Phosphorylase Kinase; domain 1 87 204 - -
Aed4g2269 375 ProSitePatterns Protein kinases ATP-binding region signature. 134 160 IPR017441 GO:0005524
Aed4g2269 375 PANTHER OS02G0821400 PROTEIN 269 365 - -
Aed4g2269 375 MobiDBLite consensus disorder prediction 335 355 - -
Aed4g2269 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Aed4g2269 375 Pfam Protein tyrosine and serine/threonine kinase 129 268 IPR001245 GO:0004672|GO:0006468
Aed4g2269 375 SUPERFAMILY Protein kinase-like (PK-like) 106 325 IPR011009 -
Aed4g2269 375 PANTHER OS01G0253100 PROTEIN 1 269 IPR045271 GO:0004714|GO:0006468
Aed4g2269 375 PANTHER OS01G0253100 PROTEIN 269 365 IPR045271 GO:0004714|GO:0006468
Aed4g2269 375 SMART serkin_6 128 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2269 375 PANTHER OS02G0821400 PROTEIN 1 269 - -
Aed4g2269 375 MobiDBLite consensus disorder prediction 77 93 - -
Aed4g2269 375 ProSiteProfiles Protein kinase domain profile. 128 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2269 Aed-Chr4 25276915 25282497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2269 97 269 Receptor kinase-like Gene Family AT1G79620 41.618 9.25e-36 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Aed4g2269 PK_Tyr_Ser-Thr 7.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2269 - - gmx:100819818 424.861