Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2265 ATGTATCATACATATTTTGATATGTCAATGTTTCCATTTTTGATGGAGGTGTCATGGGAAGAAAGTGTCACATATTCCATCAACGCAATCTACCTTCTCTTCTCGGCTTACCTCGTCTTTGTAATGCAAATTGGTTTTGCCATGATATGTGCAGGTTCCGTGCGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTGGTTGATGCAGTGGTTGGTAGCATCTCCTTCTACCTCTTTGGTTTTGCATTTGCATATGGCACTTCCAACCCTTTCATTGGCACTCATTTTTTTGCCCTTTCCCACTTTCCAAATTATGATTATGATTATGACTACGCTTTCTTCCTTTACCAATGGACCTTTGCTATAGCCGTAACAGGCATCACAAGTGGGTCCATAGCTGAGAGAACCCAATTCAGTGCCTATCTTGTTTTCTCTTTTTTCCTTAGTGGCTTTGTGTACCCAGTTGTGGTTCATTGGGTGTGGTCATCAAGTGGTTGGCTCAGTCCAACTTCAACTCACTTGTTCCTGGGCTCAGGTGCCATTGATTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCGGTTGCTGGGCTTTGGGGGTCCATAATTGAAGGCCCAAGGACCGGTCGCTTTGACCCTTTCAGAAAGCCCGTGCCTCTTCGAGGCCATAATACAACCCTTGTTGTGCTCGGAACATTCTTGTTGTGGTTTGGTTGGTTTGGGTTTAATCCAGGTTCATTTGACAAGATCGTCGTGGCCTACCCCGGAGTGTCGAACGAAGGTAATTGGACCTCGGTGGGCCGGACCGCCATGGTGACCACATTAGCCGGTTCGACTGCCGGGGTAGTCACTTTGTTCGGTCGACGATTATTAGTTGGGCATTGGGATGCTATTGATGTGTGCAATGGCTTGCTTGGAGGGTTTGTTGCCATCACTTCTGGATGCTCGGTTGTTGAGCCATGGGCCGCCATTCTTTGCGGGTTTGTCTCGGCTTGGGTTCTAATTGGGCTCAACATTGTGGCCCTAAAGATGAACTATGATGATCCATTAGAAGCAGCCCAATTGCATGGGGGGTGTGGCACTTGGGGTTTGTTGTTTACTGGCTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGTCTATAATTCAGGTGAGAGAGGGGTGACAAGACCCTATGGTCTTTTACTTGGAGGTGGATGGGGATTGATTGGAGCCCAAGTGATTGAGATTTTGGCAATAGTTGGATGGGCAAGTGTAACAATGGGCCCTATTTTCTATGCCTTACACAAGCTTGAAATATTGAGAATTCCTGTTGATGAGGAAGTTGCTGGCCTTGATATCTCGTTTCATGGAGGGTATGCTTATGCTCAAGAAAATAATCATCTCGGACTTTATGGAGATCATATTCAACATGGTGTATCTTAG 1425 0.4611 MYHTYFDMSMFPFLMEVSWEESVTYSINAIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGTSNPFIGTHFFALSHFPNYDYDYDYAFFLYQWTFAIAVTGITSGSIAERTQFSAYLVFSFFLSGFVYPVVVHWVWSSSGWLSPTSTHLFLGSGAIDFAGSGVVHLVGAVAGLWGSIIEGPRTGRFDPFRKPVPLRGHNTTLVVLGTFLLWFGWFGFNPGSFDKIVVAYPGVSNEGNWTSVGRTAMVTTLAGSTAGVVTLFGRRLLVGHWDAIDVCNGLLGGFVAITSGCSVVEPWAAILCGFVSAWVLIGLNIVALKMNYDDPLEAAQLHGGCGTWGLLFTGLFAKEEFVIQVYNSGERGVTRPYGLLLGGGWGLIGAQVIEILAIVGWASVTMGPIFYALHKLEILRIPVDEEVAGLDISFHGGYAYAQENNHLGLYGDHIQHGVS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2265 474 ProSitePatterns Ammonium transporters signature. 183 208 IPR018047 GO:0008519|GO:0016020|GO:0072488
Aed4g2265 474 Gene3D Ammonium transporter AmtB like domains 15 465 IPR029020 -
Aed4g2265 474 SUPERFAMILY Ammonium transporter 25 436 - -
Aed4g2265 474 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 15 470 - -
Aed4g2265 474 TIGRFAM amt: ammonium transporter 28 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Aed4g2265 474 Pfam Ammonium Transporter Family 31 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
Aed4g2265 474 PANTHER AMMONIUM TRANSPORTER 15 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2265 Aed-Chr4 25257413 25258837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2265 21 460 Inorganic Solute Cotransporters AT1G64780 64.798 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2265 K03320 - pvy:116129597 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2265 4 25257413 25258837 Aed4g2265 4 25257413 25258837 ECH