Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2237 ATGCGAATCCAATCTGAGTCTGAGTCTGAGTCAGAGTCAGAGTCATCCAACAAGAACAAGAACACGTTGACCCAAATGTTTCAGAACATCTTCTCAGACAACAGTAACATCATGCTTGCAGCCATAATTTCCCTCCTCCTAGTAATCCTCTTCGTCCTCCTTCTCCACCTCTACGCCAAGTGGTTCCTCGCTCAGGCCCAGGCTCAGGCCCACGCCCGCCGTCGCCGCCTCCGTAGAACCACCGTCACCGTCTCCGACGTCCTCGGCCCTGCAAGGTTCCACCACTTCCACAGCTTCAACATAGAAGATCATCATCACTCCTCCTCCTCACCCCTCTCAACAAAAGGCTTAGATTCTTCAACCATCAGAGCAATTCCACTATTCATCTATGAACACAACAACAAGGTCCAAGAAAAAGTAGTAGTAGAAGAAGAAGAAGAAGAAGAAGATGAACTTGAATGTGTGATTTGTTTGAGTGCTTTTGAGAATGGTGAAGTTGGAAGGTGTTTGCCAAAGTGTGGCCATGGCTTTCATGTTGAATGCATTGACATGTGGTTGAGCTCACACTCCAATTGTCCTATTTGTAGAGCCTCAATTGTTGTGGAAAATGATTCGGTGTCATCAAGTGATCATCATATTCATCATGGTGGAGACCATCATGATTTGGTTGAGATTGTGATTGAAGCTGCTGCTGCTGCTCCAAGTTCTTCTGAGATTATTAGAGAGGGTGAGAATAATAATGGCAATGGAGGAGGAGGAGGAGGAGGAGCAAGAACAAGTGTTTCTGTGTCAGAAACTTCTTCTGAGTTTTTTGGATGCTCTAATTTGGAGAGAATGCTTGGCAAGGTTTTCCCATCAAGTCATGTAAATTAA 873 0.4525 MRIQSESESESESESSNKNKNTLTQMFQNIFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAQAQAQAHARRRRLRRTTVTVSDVLGPARFHHFHSFNIEDHHHSSSSPLSTKGLDSSTIRAIPLFIYEHNNKVQEKVVVEEEEEEEDELECVICLSAFENGEVGRCLPKCGHGFHVECIDMWLSSHSNCPICRASIVVENDSVSSSDHHIHHGGDHHDLVEIVIEAAAAAPSSSEIIREGENNNGNGGGGGGGARTSVSVSETSSEFFGCSNLERMLGKVFPSSHVN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2237 290 CDD RING-H2_EL5_like 156 196 - -
Aed4g2237 290 MobiDBLite consensus disorder prediction 235 261 - -
Aed4g2237 290 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 16 288 IPR044675 -
Aed4g2237 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 205 IPR013083 -
Aed4g2237 290 PANTHER - 16 288 - -
Aed4g2237 290 SMART ring_2 154 195 IPR001841 -
Aed4g2237 290 SUPERFAMILY RING/U-box 140 202 - -
Aed4g2237 290 ProSiteProfiles Zinc finger RING-type profile. 154 196 IPR001841 -
Aed4g2237 290 Pfam Ring finger domain 153 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2237 Aed-Chr4 25013138 25014010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2237 31 199 Rapid Response to Elicitors AT3G16720 36.095 1.29e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2237 - - gmx:100816238 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2237 4 25013138 25014010 Aed4g2237 4 25013138 25014010 ECH
Aed4g2237 4 25013138 25014010 Aed3g1861 3 23029695 23030399 PCT