Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2235 ATGCATGGGACCTCTTCACTAAAAGAGAAATTAAAGCTACAAAACCAAAACTCAAACCATAGTGCGCTTTTATTTCATCTCTCTTTTAAGATCCTCTATGCCGTTCTAAGCGACACTACTCTCAATTCCAACTCTTCGTCACTTCACACTATGGCGGAGTGCGTGACGGACTTGGCTCAGGCTGCCGCGTGCCGAAACAGCACGGCTGCAGCACACTTAAAAGTGATTTCCATCTTTACCATTTTTGTGACCAGTGTGACGGGCGTATCTATGCCCGTCATGTTAGCACGCTATTTTCAGGGAAAGTCACTTTATGATATAGCCATTTTATTGATTAAATGCTTCGCCGCCGGTGTAATTCTTGCCACCTCGTTGGTCCACGTGTTGCCGGATGCCTTTGCCGCACTCTCTGACTGCCAGGTGGCATCGCAGCATCCCTGGAAGGACTTTCCCTTCGCCGGCCTGGTGACCCTCGTTGGGGTGCTAATGGCCCTGCTGGTAGACACTGTTGCTAGCTCGCACATGGAGCACGCGCACTACATGCCGGTGGAGACGCAGGAGAAGGAGGGTGGCGGTGGAGGCGGCGCGTGGAGCATTGAGCTGGTTGGTGGTGGTGGTGGTGAAGTGCAGAGGGTTGAAGAGTTGATGAGGTTGAAGCAGAGGCTAGTGTCCCAAGTATTGGAGATTGGGATAATCTTTCACTCTGTTATCATAGGAGTGACCATGGGAATGTCTCAGAACGTTTGCACCATTCGGCCACTTGTTGTTGCTTTGTCCTTTCATCAGATTTTCGAAGGCTTGGGCCTTGGTGGCTGCATTGCTCAGGCCGGGTTTAGCTTTGGAACTACAGCATACATGTGCTTCATGTTCTCTGTGACAACACCAATGGGGATAATTTTGGGGATGATGTTATTCTCAATGACTGGTTATGACGATAGTAACCCTAAAGCTTTGATCATGGAAGGGTTACTAGGTTCAGTTTCATCGGGCATACTAATTTACATGGCTCTTGTTGACCTCATAGCAGTTGATTTCTTTCATAACAAGCTTATGAACTCTAATGTGTACTTGAAAAAGGTGTCTTTTATTGCATTAACTCTTGGCTCTGCTTCAATGTCTGTTCTAGCACTTTGGGCTTGA 1140 0.4781 MHGTSSLKEKLKLQNQNSNHSALLFHLSFKILYAVLSDTTLNSNSSSLHTMAECVTDLAQAAACRNSTAAAHLKVISIFTIFVTSVTGVSMPVMLARYFQGKSLYDIAILLIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLVGVLMALLVDTVASSHMEHAHYMPVETQEKEGGGGGGAWSIELVGGGGGEVQRVEELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVVALSFHQIFEGLGLGGCIAQAGFSFGTTAYMCFMFSVTTPMGIILGMMLFSMTGYDDSNPKALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKLMNSNVYLKKVSFIALTLGSASMSVLALWA 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2235 379 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 53 379 - -
Aed4g2235 379 TIGRFAM zip: ZIP zinc/iron transport family 59 379 IPR004698 GO:0005385|GO:0016021|GO:0071577
Aed4g2235 379 PANTHER ZINC/IRON TRANSPORTER 53 379 - -
Aed4g2235 379 Pfam ZIP Zinc transporter 218 376 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed4g2235 379 Pfam ZIP Zinc transporter 72 179 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2235 Aed-Chr4 25003185 25005344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2235 51 379 Inorganic Solute Cotransporters AT2G30080 66.282 1.04e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2235 K14709 - gmx:100802186 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2235 4 25003185 25005344 Aed4g2235 4 25003185 25005344 ECH
Aed3g1863 3 23052942 23056542 Aed4g2235 4 25003185 25005344 ECH
Aed4g2235 4 25003185 25005344 Aed3g1863 3 23052942 23056542 PCT