Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2223 ATGGGGACAGAGGCCCAGAAATATAGCCTATGGTTTTTGCCTACGCCGAATTTGAAAGATCTCTGTCTCCAAGGAACACTAGCACCTGAAATTGGGGAACTGGTTCACCTTAAGTCAATCATTTTGCGCAACAATTATTTTCACGGAGACATCCCTATGGAGATACTACAATTAGAGGACCTGGAAGTTCTTGATTTAGGATATAACAACTTTAGTGGACAATTTCCATTTCATGACCTTGCAAGCTATCCATCGCTGACTACCCTTTTATTGGACAACAATGAATATCTTGCCAGCTTAACTCCAGAAGTGTATGAGCTCAAGACATTTTCTGAATTGCATGCAGATGAAGAACAACTAACTGTCCAGTATAGTGATGCTTATGTGTCTTCATTAACTGTGGGGCACAATGGCCAACATGGGGATATAGCATCCAGAAGGAAACTTCTCCAAGCAGCAAATGGTTCTAATGACAAAGAAACTCTTTCACCATCACCATCACCTTTTCCCTCTACACTATCACCAGTTCCTGAGCCTTTTTCACCATCAGAGAGTCCCTCAGTTTCACCATCATCTCCTGAAATTTCTCCTTCACCATTTCCATCTCTCTCCACTTTCTCACCCTCACCTTCACCTGAGGTAGCACCAACTCCAGACTTATCACCTCCAGCAAATCCACCACAGTCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTTCAAACCAAGGGAATGCAAACAGTTCAAACCCAAAGCAACATACTGTGATTATTTGGTCTACAGTTGGAGGCTTCTCCTTCTTGATTTTGGTTTCAGCCGTTGCTTTTGTTTGCTTCAGAAGTAATAAGGTTGTAACTGTCAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTACAGAAAGCATTTGTATCAGGTGTTCCAAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAAGATTTCAGCAACATTATTGGCTCACTGCCTGAGGGGACTATTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGCATCCTCTGCAGTGACTTTATCCCAAAACTGGTCCAAAAATATGGAAACTCAATTCCGAGAGAAGATCGACATGTTGTCAAGAGTAAACCACAAGAATTTTGTGAATCTTATTGGATATTGTGAAGAAAAGAAACCATTCACAAGGATGATGGTTTTTGAGTATGCTCAAAATGGAACGCTATTTGAGCATCTACACATTAGAGAAGCAGAACAACTAGACTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTATAGATCACTTGCATCAGCTGACACCACCCATTGCCTACAGAAACATACTATCTTCCTCTATATACCTGACTGAGGATTATGCTGCTAAATTATCAGACCATAATTTCTGGACTGATATACTCTCCACAAAGAAGGGTTCTGAAGCCCCACAGCTGTTGGAAACAACTTCATATATAAAGGCCAATGTTTACAGCTTTGGAGTACTATTGTTTGAAATGATTACAGGAAGAATTCCCTTTGCTGTGGAGAATGGCTTACTTGAAGATTGGGCTGCAGAATATATGAAGGGGCAACCATTGAGAGATTTGGTGGACACAAGCCTTAACTCTTTGAAAGCAAATGAAATTGAAAAATGGGAAGAAGTGATTAACAGCTGTGTACATCCAGATCCAGAAAAAAGGCCAACTATGAGAGAGGTTACTGCTAAGTTGAAGGAAATCACTGCTATGGGGCCTGATGGAGCAATTCCAAAAGCATCTCCTCTTTGGTGGGCAGAAATAGAAATCATGTCCACTGACTTAGGTTCAGATGTTAAACCATAA 1845 0.4163 MGTEAQKYSLWFLPTPNLKDLCLQGTLAPEIGELVHLKSIILRNNYFHGDIPMEILQLEDLEVLDLGYNNFSGQFPFHDLASYPSLTTLLLDNNEYLASLTPEVYELKTFSELHADEEQLTVQYSDAYVSSLTVGHNGQHGDIASRRKLLQAANGSNDKETLSPSPSPFPSTLSPVPEPFSPSESPSVSPSSPEISPSPFPSLSTFSPSPSPEVAPTPDLSPPANPPQSNWVSMPSPASSSNQGNANSSNPKQHTVIIWSTVGGFSFLILVSAVAFVCFRSNKVVTVKPWATGLSGQLQKAFVSGVPSLKRTELEVACEDFSNIIGSLPEGTIYKGTLSSGVEIAVASSAVTLSQNWSKNMETQFREKIDMLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAQNGTLFEHLHIREAEQLDWGMRMRIAMGIAYCIDHLHQLTPPIAYRNILSSSIYLTEDYAAKLSDHNFWTDILSTKKGSEAPQLLETTSYIKANVYSFGVLLFEMITGRIPFAVENGLLEDWAAEYMKGQPLRDLVDTSLNSLKANEIEKWEEVINSCVHPDPEKRPTMREVTAKLKEITAMGPDGAIPKASPLWWAEIEIMSTDLGSDVKP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2223 614 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 17 607 - -
Aed4g2223 614 Pfam Protein tyrosine and serine/threonine kinase 323 578 IPR001245 GO:0004672|GO:0006468
Aed4g2223 614 Gene3D Phosphorylase Kinase; domain 1 295 401 - -
Aed4g2223 614 Gene3D Transferase(Phosphotransferase) domain 1 402 586 - -
Aed4g2223 614 MobiDBLite consensus disorder prediction 154 251 - -
Aed4g2223 614 Gene3D Ribonuclease Inhibitor 11 145 IPR032675 -
Aed4g2223 614 SUPERFAMILY Protein kinase-like (PK-like) 302 578 IPR011009 -
Aed4g2223 614 PANTHER PROTEIN MALE DISCOVERER 2 17 607 - -
Aed4g2223 614 SUPERFAMILY L domain-like 16 121 - -
Aed4g2223 614 MobiDBLite consensus disorder prediction 168 230 - -
Aed4g2223 614 MobiDBLite consensus disorder prediction 231 251 - -
Aed4g2223 614 ProSiteProfiles Protein kinase domain profile. 319 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2223 Aed-Chr4 24903960 24907228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2223 299 590 Receptor kinase-like Gene Family AT4G31110 33.439 1.91e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Aed4g2223 PK_Tyr_Ser-Thr 2.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2223 - - gmx:100814122 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2223 4 24903960 24907228 Aed4g2223 4 24903960 24907228 ECH
Aed3g1869 3 23085252 23090435 Aed4g2223 4 24903960 24907228 ECH
Aed4g2223 4 24903960 24907228 Aed3g1869 3 23085252 23090435 PCT