Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2222 ATGGCTCCGGAGCAAAGTAGTTATATTAATAGATGCTCCTCCTCCATCGCCATACCCCTTTTGAGGGATGAAGAAGCTGAGAAGAATGGTTTCAATGGCGCGGCAGTGGCCAAAGCTTGTGATCATGTGGGTGGTAGCACGTGCAAGCGCACGTGCACGTCCTTTTTCAAGACCTGCTTCCATCTGGTTAATGCCCTCTCAGGAGTTGGTACAATATCCATGCCTTATGCACTTGCATCTGGAGGATGGTTAAGCATATTGCTGCTATTTGTGATTTCCATTGCTTGCTACTACACTGGCATATTGGTGAAAAGATGCATGGATATGTACCCTGATATCAAGACTTTTCCTGACATAGGTCAACGTGCATTTGGAGACAAAGGGAGGCTAATGGTATCAATTGCCACGAATTCTGAGCTCTACCTAGTTGTCACAGGTTTTCTGATTTTAGAGGGTGACAATCTTAACAAACTACTACCAAACATGCAACTTCACCTTGCAGGGTTAACAATTGGAGGGACAACAATTTTAACCATAGCTGCTGCCCTTATTATTTTGCCTAGTGTTTTGTTGGAGGACACGAGCTTGTTATCTTATGTCTCTGCTGGTGGGGTTTTAGCTTCTTCCATTTTCCTCCTCTCTCTATTATGGAATGGCACAATTGATGGCACTGGATTTCATGCAAAGGGGAAACCTTTAAGATGGAGTGGAATACCTACTACTCTCAGTTTATATGCCTTTTGTTATAGTGCTCATCCAATCATTCCCAGTCTCTATATTTCTATTAGAAACAAAAGTCAGTTCTCTAAAGTCCTATTTATATGTTTTTTAGCATGCACTCTTGCTTATGCAGCAGTGGCTGTTTTGGGTTACTTAATGTTTGGAGAAGATGTGAAATCACAGGTGACTTTGAACCTCCCAAGTGGCAAGTTTAGTTCACATGTAGCAATATACACTACTTTGGTCAATCCTATAACAAAATATGCATTGATGCTTACTCCGGTTATTAATGCTGTAAAAAACAAGATTTCATGCCATTACAACAAAAGGTTCACACATATGCTTGTTGCTACCTCTTTGCTCACAAGTACTCTTGTTGTAGCTGTGTCCATTCCCTTATTTGGATCCCTTATGTCACTTGCTGGGGCATTACTAAGTGTGTCAGCTTCTATTTTAGTACCATCAATGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTCGGGTCTGAAATGATCATCAACTATTCAATAACAATAATGGGGGTTCTTGTTGCTGTTGTAGGTAGTTACACATCAATAGTGGATATAGTTCACAATTTTAAGTGTCATAGGGACAAGATTGATCATTTCCACTTGTAG 1362 0.406 MAPEQSSYINRCSSSIAIPLLRDEEAEKNGFNGAAVAKACDHVGGSTCKRTCTSFFKTCFHLVNALSGVGTISMPYALASGGWLSILLLFVISIACYYTGILVKRCMDMYPDIKTFPDIGQRAFGDKGRLMVSIATNSELYLVVTGFLILEGDNLNKLLPNMQLHLAGLTIGGTTILTIAAALIILPSVLLEDTSLLSYVSAGGVLASSIFLLSLLWNGTIDGTGFHAKGKPLRWSGIPTTLSLYAFCYSAHPIIPSLYISIRNKSQFSKVLFICFLACTLAYAAVAVLGYLMFGEDVKSQVTLNLPSGKFSSHVAIYTTLVNPITKYALMLTPVINAVKNKISCHYNKRFTHMLVATSLLTSTLVVAVSIPLFGSLMSLAGALLSVSASILVPSMCYLKISGAYKRFGSEMIINYSITIMGVLVAVVGSYTSIVDIVHNFKCHRDKIDHFHL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2222 453 PANTHER OS05G0424000 PROTEIN-RELATED 10 439 - -
Aed4g2222 453 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 10 439 - -
Aed4g2222 453 Pfam Transmembrane amino acid transporter protein 53 434 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2222 Aed-Chr4 24895280 24897930 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2222 41 438 Amino Acid or Auxin Permease AAAP Family AT3G28960 51.880 8.01e-148 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2222 K15015 - gmx:100784690 611.683