Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2220 ATGGCTGGTGAGAAGGGTGATAGATGGTCCTCCAATTCCATCAGCATACCCCTTCTTGATGATGAAAAAGTTATAATTAATGGTACTTCAGATGAGGCTTTTGTGGGTAACTCCTCCTTTTTCAAGACCTGCTTCCATCTTATTAATGCCCTCTCAGGAGTTGGCATTATATCCATGCCTTATGCATTGGCATCTGGGGGATGGTTAAGCATAACACTACTATTTGTGATTGCAATTGCTTGCTGTTACACTGGAATGTTGGTGAAAAGATGCATGGATATGGACCCTGATATCAAGAATTTTCCTGACATAGGTCAACGTGCATTTGGAGACAAGGGGAGAATAATAGTATCAATTGCCATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTAATTTTAGAGGGTGACAATCTTAACAAACTAGTACCAAACGCTCAAATTGAACTTGCAGGGTTAACAATTGGTGGTACAACAATTTTTATCATCATTGCTGCCCTTGTTATTTTGCCTAGTGTTTTGTTAGAGGATTTGAGCATGCTATCTTATGTCTCTGCTAGTGGGGCTTTGGCTTCTTCCATCTTCCTCCTTTCTATATTTTGGAATGGCACCATTGATGGCACTGGATTTCATGCAAAGGGAACAACACCCTTCAGATTCAGTGGAATACCTGCTTCTGTTAGTTTATATGCCTTTTGTTATAGTGCTCATCCTATCCTTCCTACACTCTACAATTCTATGAGAGACAAAACTCAGTTCTCCAGGGTTCTGTCTGTATGCTTTTCAGTATGCACACTTGGTTATGCAGCAGCAGGTGTTTTGGGCTACTTGATGTTTGGACAAGATGTTGAATCACAAGTGACATTGAACCTCCCAACAGGAAAGTTCAGTTCACATGTTGCAATGTTAACAACCTTGGTCAATCCTATAACCAAATATGCATTGATGCTTACCCCAGTCATTAATGCTGTAAAAAACAAGATTTCATGGCATCACAACAAAAGGTTCACACACATGCTTGTTAGTACCTCCATGCTCATTAGCACTCTTATTGTAGCTGTGGCCATTCCCCTGTTTGGATATCTCATGTCATTTATTGGGGCATTACTAAGTGTCTCAGCTTCAATTTTAGTACCATCAGTGTGCTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAATTATTCAATAATAGTAATGGGAGTTACTATTGCTGTTGTGGGTACTTACACATCTCTTGTGGATATAGTCCATAATTTGTAA 1284 0.3956 MAGEKGDRWSSNSISIPLLDDEKVIINGTSDEAFVGNSSFFKTCFHLINALSGVGIISMPYALASGGWLSITLLFVIAIACCYTGMLVKRCMDMDPDIKNFPDIGQRAFGDKGRIIVSIAMNSELYLVVTGFLILEGDNLNKLVPNAQIELAGLTIGGTTIFIIIAALVILPSVLLEDLSMLSYVSASGALASSIFLLSIFWNGTIDGTGFHAKGTTPFRFSGIPASVSLYAFCYSAHPILPTLYNSMRDKTQFSRVLSVCFSVCTLGYAAAGVLGYLMFGQDVESQVTLNLPTGKFSSHVAMLTTLVNPITKYALMLTPVINAVKNKISWHHNKRFTHMLVSTSMLISTLIVAVAIPLFGYLMSFIGALLSVSASILVPSVCYLKISGAYKRFGSEMIINYSIIVMGVTIAVVGTYTSLVDIVHNL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2220 427 Pfam Transmembrane amino acid transporter protein 37 419 IPR013057 -
Aed4g2220 427 PANTHER OS05G0424000 PROTEIN-RELATED 1 425 - -
Aed4g2220 427 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 1 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2220 Aed-Chr4 24882370 24886357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2220 35 424 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.987 4.55e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2220 K15015 - gmx:100784690 732.635