Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2199 ATGGATAGTGCAACGACAAGTCAATTGAGTTCCTTTGGAATGATTGACAATGAGAAATTAGTGTGTCAATATGTAATAAAACGAACAAATAAGGGTCTTTGGTTTGGAGACAATCCCCTCCATTACAGCACCTCTATCTTATTTATTCAGATTATTGTGATGTACATTGTCGGTAGAACCACTTATCTCGTGTTAAGGCCATTTCATCAAACCTTTCCCGTTGCACAGATCTTGATGGGGGTGCAAGTCGATCCCAAGCAGATCTTAAAGATAGAAAAGCAAGCAATAGTGATTGGCATAATAGGCCACATGTCTGCTTTAGCAGTTGGTGGTGTAATTTTCAACATTGCTAGAGCAATGTACCCTGAAAGCACAGAAGACAGTAGTGTTCATGTTTTATTGATATCAAGTTCTGTGACTACATTTCCTGTTGTTAGTTGCTTCCTAACAGAGATGAACATTCTTAATTCAGAAATTGGACGCATGGCTGTATCCACTTCCATGGTTAGTGATTCATGCATGTGGGTGTTGTATTTTGTGGTAATCAGTAGTGCTAAAGCAGTGGCACACCAAACATTTACACCTATTACACAAATAGCTGTTTCAATTTGTTTTTTCTCCATCTTGTTCTTTTTTCTAAGGCCATTGGTTATATGGATCTCAAACCGAAATCCACAAGAGAAGCCTATGACAGAAAGTCATTTCTTGTCAATCATTTGTATATTACTATTTGTTGGACTCGCTGCAAGTGTTACAGGACAACCTCCTTTTCTTGTTGCCTTTTGTTTTGGTTTGATCCTACCGGATGGTCCTCCTTTAGGTTCTGTCCTCTCTGAAAGACTTGACACTATTGGTTCCACTTTGATGGTTCCATCTTATTGTACTATCACTGGCATCGGAACCAATATTTCTTCATTAGAACAATCCAAGTCGACAATGACCATAGAGGTTATCTTACTTGCAATGTACAAAGCCTATATTAGAAAGACAGTTAGAGATGCTCAAAATGAGCCTGATCTGAAAATACTTGTTTGTGTTCACAATGAAGAAAATGTATATCCAATCATCAACCTTCTTCAAGTCTCAAACCCCACAAGGGCTACACCCCTCTCGGTCTGTGTCCTACATCTTATAGAGCTCTTAGGCAATGCAATTTCTACTCTCAAAAAAGATAATAAGGTAACTTGCAAGTCATCTCGACACATAAACAATGTCTTCGATCAATTTCAAATACATAACAAAGGGAGTGCCATGGTTCAATGCTTCACTACAATCACCCCTTATGCAAGCATGCACGATGACATATGCTATATGGCAATGGACTCCAAATCCAACATTGTAATTATGCCATTTCACAAGCAATGGTCCATAGATGGAAATGTTGAGTACACTAATGCTTCAATTAGGATACTAAACCAAAATGTTTTGAAGAAAGCTCCTTGCTCAGTTGGAATCTTCATAGACAGAAGCCAGATGAGTGGAGAACTCTTGATCATGTATGAGAAATCATTTTGTGAAATTGCAATGGTGTTCTCAGGAGGAGGCGATGACCAAGAAGCATTGGCTTATAGTTTACGTTTAGCACAGCATCCAAATGTGAGACTAACGGTGTTTTGGTTAAGGGTGAAAATGCAAGGGAGCAACCAAAGGAAAACAAAGAACCCTTACGTTGATTTGATGGAGTACATACGTTATAGTAGTTACCATGAAGGGAAAGTGACATTCAAGGAAGAGATTGTGGAAGATGGAGCAGGAACAACACAAGTTATTCGAAGGATAGAAGGACATTATAGTTTGGTTATAGTTGGTAGACATCATTTGGCAGACTCTCCATGTACACTAGGCTTGTCAGAATGGTGTGAACTTCCTGAGCTTGGTCCTCTTGGGAACCTCTTAGCCACTTCAGATTTTACATTTTCTGTTTTGGTGCTGCAACAACAACCACCCTTTAATTATGAATTTCGATATTGTGATTCTCATTAA 1983 0.3878 MDSATTSQLSSFGMIDNEKLVCQYVIKRTNKGLWFGDNPLHYSTSILFIQIIVMYIVGRTTYLVLRPFHQTFPVAQILMGVQVDPKQILKIEKQAIVIGIIGHMSALAVGGVIFNIARAMYPESTEDSSVHVLLISSSVTTFPVVSCFLTEMNILNSEIGRMAVSTSMVSDSCMWVLYFVVISSAKAVAHQTFTPITQIAVSICFFSILFFFLRPLVIWISNRNPQEKPMTESHFLSIICILLFVGLAASVTGQPPFLVAFCFGLILPDGPPLGSVLSERLDTIGSTLMVPSYCTITGIGTNISSLEQSKSTMTIEVILLAMYKAYIRKTVRDAQNEPDLKILVCVHNEENVYPIINLLQVSNPTRATPLSVCVLHLIELLGNAISTLKKDNKVTCKSSRHINNVFDQFQIHNKGSAMVQCFTTITPYASMHDDICYMAMDSKSNIVIMPFHKQWSIDGNVEYTNASIRILNQNVLKKAPCSVGIFIDRSQMSGELLIMYEKSFCEIAMVFSGGGDDQEALAYSLRLAQHPNVRLTVFWLRVKMQGSNQRKTKNPYVDLMEYIRYSSYHEGKVTFKEEIVEDGAGTTQVIRRIEGHYSLVIVGRHHLADSPCTLGLSEWCELPELGPLGNLLATSDFTFSVLVLQQQPPFNYEFRYCDSH 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2199 660 PANTHER CATION/H + ANTIPORTER 76 323 - -
Aed4g2199 660 Pfam Sodium/hydrogen exchanger family 79 321 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed4g2199 660 Gene3D - 47 331 IPR038770 -
Aed4g2199 660 PANTHER CATION/H(+) ANTIPORTER 14 76 323 - -
Aed4g2199 660 PANTHER CATION/H(+) ANTIPORTER 14 33 79 - -
Aed4g2199 660 PANTHER CATION/H(+) ANTIPORTER 14 323 648 - -
Aed4g2199 660 PANTHER CATION/H + ANTIPORTER 33 79 - -
Aed4g2199 660 PANTHER CATION/H + ANTIPORTER 323 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2199 Aed-Chr4 24716386 24719320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2199 323 647 Antiporter Super Family AT1G06970 41.791 7.93e-83 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2199 - - aprc:113851213 684.1