Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2198 ATGGACAGCCTCACTCACAATAATGACATGCATGCTGGAGCCAAGGCAGCTAAGACGTTCTTTGGAGGGCCATTCATATGTCACAGTACAGTTAATCAAATCAACTCCAAGGGGATTTGGTATGGAGATGACCCACTTGCATATTATCTCCCTCTCTTCTTGCTCCAACTTTTCCTCATTCTCAGCTTTACACGTATCGTTCACCTTATTCTCAAGCCACTTGGTCATCCGTCTTTTGTTTCTCAGATTATTGGTGGTGTGACATTAGGTCCTTCCATTCTTGGGAGCAACATAAAATTCCTGGACAAGGTTTTCCCAGCAAAAGGAAAAACTGTGATTGATACCATAGCCTTTTTTGGTTTTATGTTATTCATCTTCCTAATTGGGGTAAAGATAGATCCAACCATCACTTTTAGATCAGGTAAAAGGACTTTTGTCATAGGAATTTTAGCCTACTTTGTTCCTTTCACATTTGCCAGAACGGTGGTGTTTATCCTCACCCACTTTGCATCAATGGATAATGATGTTTATAAAGTGCTCCCTATTGTGGTAGAAATTCAATGTATATCAGCCTTTCCAGTAATTGCTCGCTTCCTTGCTGAGCTTCAGATCCTGAATTCAGAAATTGGGCGGTTGGCCACTTCTTCTTCATTAGTGTGCGATGCTTGCTTCGTTTTAATTATGACAGTAAGATTTATGTTAAGGTTATCCTTCTCAAAGTCAATAGGAGTATCTATTGGATCTTCCTTGTCCATCACTCTGCTTATTGTATTCATCATCTTTGTAGTTCACCCAGCTGCAATATGGGCAATTCAACAATCACCAGAAGGGAAACCTGTTCAGGAAATTTATATATGTGGGGTTCTTTTGACACTAACGATTTGTGCATTCATAGGTGAAGTTATTGGCCTAAATGCAATTATTGTATCTTTCTTGGTGGGGCTGGCTATACCAGATGGTCCACCATTGGGGGCAGCATTGGTACATAAGCTTGATTCCTTTGTTTCAGTAGTGTTTGCACCTATCCTTTTCATTGTAGTTGGATTAATGACAGATGTGTATGCCATACACAAGATGAAGAACATAGCTATAATTCAATCCATTGTTTGGATTGCTTTTTGTGGGAAAGTTTTAGGGGTTTTGTTACCTCTCCTTTTCCTTAGGATGCCACTTCGAGATGCCTTTGCTCTTGGTCTTGTAATGAACTGCAAAGGCACTGTTGAATTGGCCTTGCTGGTTGACTTGAAATTGAAAAATGCGATGAATGATGAATGCTTTGCAATTTTGGTTCTTTCTTTAGTGCTTGTAACTGGGGTTATGTCACCTATTATGAAAACTCTATATGATCCTTCTAAGAGGTTTCTTGCTTACAAAAGGAGGACAATTATGCATCATCGCAATGATGAAGAACTGCGCATACTAGTTTGCATTCATAAACATGATAATGTTTTGGCTATTTTGAACCTCCTTACAACTTCCAATCCCACAGAAGCAAGTCCTGTTGACTTAGTTGTGCTTCAACTTGTTAAGCTAGTTGGGAGAGCTTCCTCTCTTCTTGTTGCACATGTTCCCTGCAAAAAGCCTGGTCAACTTCCTACTCAAACTGATAAGATTTTCAACTCATTCAAAAAGTTTGAAGATGTAAACAAGGGCAAGGTCAGACTACATTCCTATAAGGGCATTTCTCCCTATAGTTCTATGCACAATGATGTGTGCTACTTGGCACTTGAAATGAGAACAACTCTCATTATCATACCTTTTCATAAGCAATGGATATTTGGAGGGACAACTGAATCATCTTCTGCTTATAAGCAGCTCAACAAGAATGTTTTAGAGAAATCTCCTTGCTCAGTTGGTATCCTAGTTGATCGTGGTAATCAAAAGATGTTTTGGTGTGGCTTCACAAAGGGATCCAAGTATCAAGTGGCTGTGCTATTCTTTGGTGGTGCTGATGATCGAGAAGCGCTTTCATACGCCAAACGCATGCTAGATCAACCTTATGTACATATAACTCTTTTTCATTTTGCATCCTCAAATGCTGATCAAGAGATTGTTGGAGGAACAGAAAGGAGCAAAATGCTTGACACACAGATCTTGAGTGAGTTTAGGCTTAAGGCTTTCAGGAATGAGAGAGTTTCTTACAAAGATGAGATGGTTATGAATGGAAGGGATATACTTTCAGTTATTGAATATATGGAGAGTTATTATGACCTTGTCATGGTTGGGAAGAGGCATGCAGATTCAAATTTAATGTCTGAAATTGGCAAATGGAAGTATGGAGAGTTGGGAATTATAGGAGAGATTCTTGTTTCTTTAAACATTGGACCCAAAACATCAATGTTAGTGGTGCAACAACAAACCAAATTTTGGGGATCACGTGATCCAGAAGAGTCCACACATTTGAAAAGAGAAGATAATATATCCCATAATGTTAGGGTTTCACACCAAGAATCATTTGTATAA 2463 0.3902 MDSLTHNNDMHAGAKAAKTFFGGPFICHSTVNQINSKGIWYGDDPLAYYLPLFLLQLFLILSFTRIVHLILKPLGHPSFVSQIIGGVTLGPSILGSNIKFLDKVFPAKGKTVIDTIAFFGFMLFIFLIGVKIDPTITFRSGKRTFVIGILAYFVPFTFARTVVFILTHFASMDNDVYKVLPIVVEIQCISAFPVIARFLAELQILNSEIGRLATSSSLVCDACFVLIMTVRFMLRLSFSKSIGVSIGSSLSITLLIVFIIFVVHPAAIWAIQQSPEGKPVQEIYICGVLLTLTICAFIGEVIGLNAIIVSFLVGLAIPDGPPLGAALVHKLDSFVSVVFAPILFIVVGLMTDVYAIHKMKNIAIIQSIVWIAFCGKVLGVLLPLLFLRMPLRDAFALGLVMNCKGTVELALLVDLKLKNAMNDECFAILVLSLVLVTGVMSPIMKTLYDPSKRFLAYKRRTIMHHRNDEELRILVCIHKHDNVLAILNLLTTSNPTEASPVDLVVLQLVKLVGRASSLLVAHVPCKKPGQLPTQTDKIFNSFKKFEDVNKGKVRLHSYKGISPYSSMHNDVCYLALEMRTTLIIIPFHKQWIFGGTTESSSAYKQLNKNVLEKSPCSVGILVDRGNQKMFWCGFTKGSKYQVAVLFFGGADDREALSYAKRMLDQPYVHITLFHFASSNADQEIVGGTERSKMLDTQILSEFRLKAFRNERVSYKDEMVMNGRDILSVIEYMESYYDLVMVGKRHADSNLMSEIGKWKYGELGIIGEILVSLNIGPKTSMLVVQQQTKFWGSRDPEESTHLKREDNISHNVRVSHQESFV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2198 820 Pfam Sodium/hydrogen exchanger family 59 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed4g2198 820 PANTHER OS08G0117800 PROTEIN 25 793 - -
Aed4g2198 820 PANTHER CATION/H + ANTIPORTER 25 793 - -
Aed4g2198 820 Gene3D - 52 454 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2198 Aed-Chr4 24711842 24714673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2198 26 815 Antiporter Super Family AT2G13620 37.914 1.69e-172 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2198 - - gmx:102665255 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2198 4 24711842 24714673 Aed4g2198 4 24711842 24714673 ECH
Aed4g2198 4 24711842 24714673 Aed3g1904 3 23339682 23342069 PCT