Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2190 ATGTCTTCTACTACTACTCTTCAATGGCTAAGCCTTGTTGGTGTAATTTGGCTCCAAGTCATAAGTGGAACAAACACAAATTTCCCTGCTTACTCTTCTCAGTTGAAGCAACTTTTCTCCATATCCCAAGTCCAACTCAACAACCTTGCTTTTGCATCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTTGCTTCTATTTACCTACCACTTTGGTTAGTCCTCTTCGTTGGTTCAACTCTCGGGTTTGTAGGTTATGGTGTTCAATATCTCTTCATAACCAACCAAATCTCCTCTTTGTCCTATTGGCATGTTTTCATGCTAACCTTTCTTGCTGGCAATAGCATTTGCTGGATCAACACAGTGTGCTATGTTGTCACCATAAGGAACTTTTTGTCTTATCGCCAAGTTGCTGTTGGAATAACAACTAGCTACCAAGGACTCAGTGCAAAGATTTATGCCAACATTGTTGATGCTGTTTCTCCTCACAAGAAGGCTGAAGCGTTTCTCTTTCTCAACTCTCTCTTGCCTGTGATGGTTGGCCTAGTAGCAGCACCTCTAGTCACAGAAATTGAAGTCACAACAAGTTCTAGTATTAAGTACACGCGTGTTGGGTTTGCTGTGATGTTTGCTATTACAATTTCAACTGGAGTATATGCTGTGTTGAGCAGCTTGCAATTTGTCACAAGCAAAGCTTCCCCACTTGGTATCTTGATTGGTATTCTAGTGTCCCTTCTCTTGCCTCTACTAGTCCCTCTTTCAGCCAAGATCAAGGAACTTCTGAACAATATAGAGAAATTGAGAATCTACAATTTCACCATGGAGGAGAATTATACTAGTGAAGAGAGGGTGGAGAATAATAGTGAGGTGAAAGAGGGTGAAGTTCAAGAAGACGGTGGTGGCATTATAGAAGAAGTTGGAGTGAAGTTGATGTTGAGAAGAATAAATTTCTGGTTATATTTCTCTGTCTATTTTTTCGGTGCAACAGTTGGTTTAGTGTATCTTAATAACTTGGGACAAATAGCTGAATCTCGGGGTTGCTCTAATACTTCATCTTTGGTGTCTTTGGCATCATCATTTGGATTCTTTGGCCGTCTCATTCCATCTCTTATGTACTACTTCTACAGGGGAAAGTGTAGAATTTCAAGACCTGCTACTATGTTGGCAGCGATGGTTCCAACATCAGGTGCATTTTTCATGCTTCTCAACAAAACTGACATTGCTCTATACATAAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCACAGAGCTATTTGGTACTAAGAATTTCTCAGTGAACCATAATGTGGTGGTGGCAAACATTCCTATTGGCTCCTTTATATATGGCTACTTAGCTGCACTTGTTTACCATAAGGAAGGGAATGAACATGGAAAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCTTGTGGGGTTGCTTTTGTTTACTTGGAACTCTTTTGGCTTTCATTTTACATGCTAGGACTCGCAAGTTTTACTCAGAGAAACAATAG 1551 0.4075 MSSTTTLQWLSLVGVIWLQVISGTNTNFPAYSSQLKQLFSISQVQLNNLAFASDAGKLFGWFSGLASIYLPLWLVLFVGSTLGFVGYGVQYLFITNQISSLSYWHVFMLTFLAGNSICWINTVCYVVTIRNFLSYRQVAVGITTSYQGLSAKIYANIVDAVSPHKKAEAFLFLNSLLPVMVGLVAAPLVTEIEVTTSSSIKYTRVGFAVMFAITISTGVYAVLSSLQFVTSKASPLGILIGILVSLLLPLLVPLSAKIKELLNNIEKLRIYNFTMEENYTSEERVENNSEVKEGEVQEDGGGIIEEVGVKLMLRRINFWLYFSVYFFGATVGLVYLNNLGQIAESRGCSNTSSLVSLASSFGFFGRLIPSLMYYFYRGKCRISRPATMLAAMVPTSGAFFMLLNKTDIALYISTAVIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPIGSFIYGYLAALVYHKEGNEHGKCMGMECYRNTFILWGCFCLLGTLLAFILHARTRKFYSEKQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2190 516 Pfam Nodulin-like 8 253 IPR010658 -
Aed4g2190 516 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 515 - -
Aed4g2190 516 SUPERFAMILY MFS general substrate transporter 9 510 IPR036259 -
Aed4g2190 516 CDD MFS_Mch1p_like 7 498 - -
Aed4g2190 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 515 - -
Aed4g2190 516 Gene3D MFS general substrate transporter like domains 311 512 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2190 Aed-Chr4 24674540 24676373 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2190 3 515 Nodulin-like Gene Family AT2G30300 48.369 7.74e-150 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2190 - - gmx:100793370 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2190 4 24674540 24676373 Aed4g2190 4 24674540 24676373 ECH
Aed4g2190 4 24674540 24676373 Aed3g1915 3 23417487 23419364 PCT