Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2187 ATGATTCCAATGTCCTTGCCAAGCTTCTTAACTATCCGTTCTGCTGCACATCAATGGCTAAGCCTTGTAGGCATCATTTGGCTCCAAGCCATCAACGGAACAAACACTAATTTCCCTGCTTACTCTTGCCAGCTCAAACAGCTTCTCTCCATATCCCAAGTGCAGCTCAATAACCTTGCATTTGCCTCTGATGCTGGCAAACTTTTTGGCTGGGTTTCTGGTCTTGTTTCCATCTACCTCCCCCTATGGCTAGTTCTCTTGATTGGTTCAACTCTTGGGTTAGTAGGTTATGGTGTGCAATATCTCTTCATAACCAACCATGTTTTCTCTTTGTCCTATTGGCATGTTTTCTTTCCAACTTTTCTTGCTGACAATAGCATTTGTTGGATTAACACAGTGTGCTATGTTGTCACCATAAGGAATTTCCCATCTGAAGCCCAAGTTGCTGTGGGAATAACAACTAGCTACCAAGGGCTAAGTGCAAAGATTTACACTGACATTGTTGGTTCTTTTTCTCCTCCTCGCAAGAAAGCTACAACCTTTCTCTTCCTTAACTCTCTCTTACCCTTTATAGTTAGCCTAATAGCACCTCCTCTAGCTAGGGTAATTGAGGCCACAGGTCTTAAGAACATTGGTTTTGAATTTGCCTTGTTGTTTGTCATTACAATTGCGACTGGAATATATGCTGTGATGACCAGCTTGCAATTTGTCACAAGCGAAATGCCCTCACTGGTCATTCTGATAGTTGATAATTGTTTTGTGTTCAGGGGAAAGCGTAGAATTTCAAGACCTGCTTCGATGTTAGCAGTGATGGTTCCAACATCAAGTGCATTTTTATTACTTCTCAACAAAACTGAGTTTGCTCTATACATAAGCACTGCAGTGATTGGAGTGTGTACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCAGTGAGTTATTTGGTACCAAGAATTTCTCAGTGAACCATAATGTGGTGGTGGCCAATATTCCAATGGGGTCCTTTTTGTTTGGCTACTCAGCAGGACTTAATTACCATAAGGAAGGGCATGAACATGATGGGAATTGCATTGGCATGGAATGCTACAGAACCACTTTCATCATCTGGGGTTACTTTTCTTTACTTGGCACCTTCTTGGCTTTGATTCTACATGCAAGGACTCGCAAGTTTTATTCACATAATCAACCCTAG 1194 0.4188 MIPMSLPSFLTIRSAAHQWLSLVGIIWLQAINGTNTNFPAYSCQLKQLLSISQVQLNNLAFASDAGKLFGWVSGLVSIYLPLWLVLLIGSTLGLVGYGVQYLFITNHVFSLSYWHVFFPTFLADNSICWINTVCYVVTIRNFPSEAQVAVGITTSYQGLSAKIYTDIVGSFSPPRKKATTFLFLNSLLPFIVSLIAPPLARVIEATGLKNIGFEFALLFVITIATGIYAVMTSLQFVTSEMPSLVILIVDNCFVFRGKRRISRPASMLAVMVPTSSAFLLLLNKTEFALYISTAVIGVCTGAITSIAVSTTSELFGTKNFSVNHNVVVANIPMGSFLFGYSAGLNYHKEGHEHDGNCIGMECYRTTFIIWGYFSLLGTFLALILHARTRKFYSHNQP 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2187 397 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 248 - -
Aed4g2187 397 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 14 248 - -
Aed4g2187 397 Pfam Nodulin-like 18 248 IPR010658 -
Aed4g2187 397 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 251 395 - -
Aed4g2187 397 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 251 395 - -
Aed4g2187 397 SUPERFAMILY MFS general substrate transporter 208 390 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2187 Aed-Chr4 24652231 24653908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2187 222 395 Nodulin-like Gene Family AT2G30300 42.614 9.28e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2187 - - gmx:100797596 408.297