Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2185 ATGGCAGCACATTCTCCTATTCTTGCAATAATATTAGTTGTGTTAGTTCTTCTTACAGGGACCTCTTCAGCTACCCTTTCAAGGAACTTCTATTCGAAGACATGTCCGAATGTTTTCAACACTGTGAAATCAGTTGTTAAATCTGCTGTGGCCAAAGAACCTCGTATTGGAGCTTCTCTTGTTCGCCTCTTCTTCCACGACTGCTTTGTTAATCTTGGTGGGCCATTTTGGAAAGTTAAACTTGGAAGAAGGGATTCTAGAACTGCAAACTTCACAGCTGCAAACACTGGTGTTATTCCACCTCCTACATCAAACCTTACCAACCTTATCACAAGGTTTCGAGATCAAGGACTCTCTGCTAGGGACATGGTTGCCTTATCTGGATCTCACACAATTGGGAAAGCAAGGTGTACTAGTTTCAGAAACCGCATTTACAATGAGAGCAACATTGACAGAACATTTGCATTGGCAAAGCAGAGGAATTGTCCTAGGAGTAATGGCACAGGTGACAACAATCTTGCAGTTCTAGACATCAAAACTCCAAATCATTTTGACAACAACTACTTCAAGAATCTTCTCAACAAAAAGGGACTCCTCCATTCTGATCAGGTTCTTTTTAATGGTGGATCTACTGATTCACTTGTCAGAACTTACAGCCAGAATAACAAGGCCTTTGATTCTGACTTTGTTAAAGCAATGATTAGAATGGGAAATAACAAACCCTTAACTGGGTCACAAGGGGAGGTTAGGAACAACTGCAGAAGAGTGAATTAA 774 0.4083 MAAHSPILAIILVVLVLLTGTSSATLSRNFYSKTCPNVFNTVKSVVKSAVAKEPRIGASLVRLFFHDCFVNLGGPFWKVKLGRRDSRTANFTAANTGVIPPPTSNLTNLITRFRDQGLSARDMVALSGSHTIGKARCTSFRNRIYNESNIDRTFALAKQRNCPRSNGTGDNNLAVLDIKTPNHFDNNYFKNLLNKKGLLHSDQVLFNGGSTDSLVRTYSQNNKAFDSDFVKAMIRMGNNKPLTGSQGEVRNNCRRVN 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2185 257 PANTHER PEROXIDASE 70 256 - -
Aed4g2185 257 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Aed4g2185 257 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PANTHER PEROXIDASE 72-RELATED 6 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PANTHER PEROXIDASE 72-RELATED 70 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 Gene3D - 72 257 - -
Aed4g2185 257 ProSiteProfiles Plant heme peroxidase family profile. 37 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 Pfam Peroxidase 71 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 ProSitePatterns Peroxidases proximal heme-ligand signature. 122 132 IPR019793 -
Aed4g2185 257 Gene3D Peroxidase, domain 2 100 236 - -
Aed4g2185 257 CDD secretory_peroxidase 26 256 IPR033905 GO:0004601|GO:0042744
Aed4g2185 257 Gene3D - 26 71 - -
Aed4g2185 257 PRINTS Plant peroxidase signature 201 213 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2185 257 PANTHER PEROXIDASE 6 71 - -
Aed4g2185 257 SUPERFAMILY Heme-dependent peroxidases 26 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2185 Aed-Chr4 24632971 24635381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2185 10 71 Peroxidase AT5G58390 56.452 1.71e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2185 K00430 - gmx:100813384 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2185 4 24632971 24635381 Aed4g2185 4 24632971 24635381 ECH
Aed3g1923 3 23498570 23502096 Aed4g2185 4 24632971 24635381 ECH
Aed2g1007 2 7941500 7942688 Aed4g2185 4 24632971 24635381 ECH
Aed4g2185 4 24632971 24635381 Aed3g1923 3 23498570 23502096 PCT