Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2182 ATGGAGAGTAAGCCAAATTTCTTAATGCAAAGATTTGAGTTAGGAAGATTACTTGGCCAAGGAACCTTTGGAAAGGTTTACTATGCTAGGAGTACAATAACTAACCAGAGTGTGGCTATTAAAGTGATTGACAAAGATAAGGTTATGAGAACTGGGCAAGCAGAACAAATCAAGCGCGAAATATGTGTTATGAGACTGGCCAAGCACCCCAATATTATACAGCTCTTTGAGGTTTTGGCCAACAAGAGTAAGATTTACTTTGTTATAGAATATGCTAAAGGTGGTGAGCTATTCAACAAGGTGGCCAAAGGAAAACTCAAGGAAGATGTTGCACACAAGTATTTTAAGCAGCTGATCAATGCTGTTGATTTTTGTCACAGTAGAGGTGTGTACCACCGAGACATAAAGCCTGAGAACATTCTATTGGATGAGAATGGGAATCTAAAGGTTTCTGACTTCGGTTTAAGCGCACTTGTTGAATCCAAGAGGCAGGATGGCTTACTCCATACACCTTGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGCAGCAAAGCTGATATATGGTCTTGTGGAATTGTTCTGTTTGTCTTGTTGGCTGGTTATCTCCCTTTCCACGACCCGAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGTCCTAATTGGTTCCCACCAGAAGTATGCGAGCTATTGAGCATGATGTTGAATCCAAATTCTGACACTAGGATTCCCATATCTACTATTAGGGAAAATTCTTGGTTTCAGAAAGGACCAAATGTTAAAAACAAAAGACCTGTGGTGGAAAACAACACTGTCTCTTCTTCAGGTGCAGCTCTTCCTGATCAAAATGACTGTGATGGTCTAGCAGCAGAAGCAAATGGGGAGTCAGTTGTTCCCTTAAGTATAAACGCCTTTGATATTATCTCCCGTTCCGTTGGTTTTGATCTTTCTAGATTCTTTGATGACAGTTTTCAGAAAAGGGAAGCAAGGTTCAGTTCAAGGTTACCTGCAAATGTCATAATCTCCAAGCTGGAAGACATTGCTAAGCAACTGAGGATGAAAATAAAGAAAAAAGCTGCTGGTTTGTTGAAATTAGAGAGCTTCAATGAAGGTAGGAAGGGAGTTTTGTCCATCGATGCAGAGATCTTTGAGAATCCATTGACAGTCAGAAAGCTTATAATTAAAGAGCAGAGCCAGACACTAAACTCTGTTTGTTTGGCATGA 1260 0.4008 MESKPNFLMQRFELGRLLGQGTFGKVYYARSTITNQSVAIKVIDKDKVMRTGQAEQIKREICVMRLAKHPNIIQLFEVLANKSKIYFVIEYAKGGELFNKVAKGKLKEDVAHKYFKQLINAVDFCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALVESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGSKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPPEVCELLSMMLNPNSDTRIPISTIRENSWFQKGPNVKNKRPVVENNTVSSSGAALPDQNDCDGLAAEANGESVVPLSINAFDIISRSVGFDLSRFFDDSFQKREARFSSRLPANVIISKLEDIAKQLRMKIKKKAAGLLKLESFNEGRKGVLSIDAEIFENPLTVRKLIIKEQSQTLNSVCLA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2182 419 PANTHER - 2 397 - -
Aed4g2182 419 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2182 419 Pfam NAF domain 311 369 IPR004041 GO:0007165
Aed4g2182 419 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Aed4g2182 419 Gene3D Kinase associated domain 1, KA1 309 405 - -
Aed4g2182 419 CDD CIPK_C 315 396 - -
Aed4g2182 419 Pfam Protein kinase domain 13 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2182 419 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 397 - -
Aed4g2182 419 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Aed4g2182 419 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2182 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Aed4g2182 419 SUPERFAMILY Protein kinase-like (PK-like) 8 284 IPR011009 -
Aed4g2182 419 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2182 Aed-Chr4 24616121 24618472 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2182 1 396 CBL-interacting serine-threonine protein kinases AT5G58380 64.634 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed4g2182 Pkinase 2.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2182 - K07198 gmx:100790905 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2182 4 24616121 24618472 Aed4g2182 4 24616121 24618472 ECH
Aed3g0893 3 6512269 6513976 Aed4g2182 4 24616121 24618472 ECH