Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2174 ATGTATTCCAATAAAGGGTGTAAGGAGGATGACAAAGCTGAGCCTCGTTACATGGAAACCGATCCAACTGGTAGATATGCTCGGGTTGGAGATATTCTAGGAAAAGGGGCAATGAAGACAGTGTATAAAGCAATTGATGAGGTACTTGGAATAGAAGTAGCATGGAACCAGGTCAAACTGTGTGAGGCACTTCGCAAACCAGAGGACTTGGAGCGGCTTTATTTAGAAGTTCATCTCCTCAGCACCCTCAAGCACCAATCCATCATGAGATTCTACACCTCTTGGATTGATGTTCACAACAAGACCTTCAATTTCATTACAGAAATGTTTACTTCAGGGACACTCAGAGAATACAGGAAGAAATATGAGCACATAGGTCTACAAGCAATAAAGAGTTGGACTCGCCAAATCTTACAGGGTCTTGTTTATCTACATGAACATGATCCTCCAGTAGTTCATAGGGACCTCAAATGTGATAACATTTTTGTCAATGGCCATCTTGGACAAGTGAAAATTGGTGACCTGGGTCTAGCAGCAATTCTCCATGGTTCCCAACCAGCCCATAGTGTTATAGGCACCCCAGAGTTCATGGCACCAGAATTATATGAGGAAGAATACAATGAACTTGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGATTATCCATATAGTGAATGTACCAACCCTGCACAGATATACAAGAAAGTGACATCGGGGAAGCTACCAGCATCATTTTTCAGGATTGAAGATACAGAAGCACAAAAGTTTATTGGCAAATGTCTAATAACTGCAGCAAAGAGACCATCAGCAAAAGAATTGTTGAATGATCCATTTCTTTTGTCTGATGATGCATCATCCATGACAAAGATTGGAATTCAGAAGCCATTTTTAAATTACAACGAAATGGAAAAGCTTCAATTGAATGATGATTCACCTAGGACTGAAATGTCAATAACTGGGAAGCTAAATCAAGAACATGATACTATCTTTCTCAAAGTGCAAATTTCTGACAAGGATGGCTCTTGTAGGAATGTATATTTTCCCTTTGACATATACAATGACACTCCCATTGATGTTGCAATGGAGATGGTAAAAGAGTTGGAGATCACAGATTTGAAGCCTTCTGATATTGCAAATATGATTAAAGGAGAGATATATGTGCTGCTTCCAAATAAGAGAAATAGTAACTGTTCAGACACCTGCCATACATTCAGTTATCACGATGACGACGATGATGAATGTCCTCGCCATCATTTCCACTCTGTCTCTTCTTGTTCATCATCCCAAGAATCAATATCAGGCACAGTCAGTGATTTACTTGATGATGATGCCAGTTCAATATGCTCTTCACATGGGACATATTCCAACTCAAACTTTGACCAAGAGGAACAGCATAAGGCTTCTACAAGAAAAGATAAACATCCCATCATAAAGAGTTACATGTGCACAAGATTTTCCCCTAATGAAGACCCCATCACTTTGAACCAGTGCAAAGTTTTGGCAGGACCACATGCACCTTCTTCTACAAGCAAAAATAAGAGGGTGATGATGGACAATCGTAGACTAACAAGGAACAAGTCATTAATTGACATGAGGAGCCAGCTACTGCACAGATCACTGGTTGAGGAGGTGAATAAAAGAAGGTTATTCAAGACAGTTGGATCTGTGGAAAATATTGGATTTGTGACACCTTATGTGGTTACCAACAAAAAGTCACATCCAGCATGTGGTGCTTTTGATGCGAATGTGAACTCTTCTAGAAGTAGCAAGAGAGAAAACAAAAAAAATTAA 1809 0.3952 MYSNKGCKEDDKAEPRYMETDPTGRYARVGDILGKGAMKTVYKAIDEVLGIEVAWNQVKLCEALRKPEDLERLYLEVHLLSTLKHQSIMRFYTSWIDVHNKTFNFITEMFTSGTLREYRKKYEHIGLQAIKSWTRQILQGLVYLHEHDPPVVHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSDYPYSECTNPAQIYKKVTSGKLPASFFRIEDTEAQKFIGKCLITAAKRPSAKELLNDPFLLSDDASSMTKIGIQKPFLNYNEMEKLQLNDDSPRTEMSITGKLNQEHDTIFLKVQISDKDGSCRNVYFPFDIYNDTPIDVAMEMVKELEITDLKPSDIANMIKGEIYVLLPNKRNSNCSDTCHTFSYHDDDDDECPRHHFHSVSSCSSSQESISGTVSDLLDDDASSICSSHGTYSNSNFDQEEQHKASTRKDKHPIIKSYMCTRFSPNEDPITLNQCKVLAGPHAPSSTSKNKRVMMDNRRLTRNKSLIDMRSQLLHRSLVEEVNKRRLFKTVGSVENIGFVTPYVVTNKKSHPACGAFDANVNSSRSSKRENKKN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2174 602 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Aed4g2174 602 MobiDBLite consensus disorder prediction 459 478 - -
Aed4g2174 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Aed4g2174 602 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2174 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 583 - -
Aed4g2174 602 PANTHER WNK KINASE 23 583 - -
Aed4g2174 602 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Aed4g2174 602 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2174 602 SUPERFAMILY Protein kinase-like (PK-like) 28 323 IPR011009 -
Aed4g2174 602 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2174 Aed-Chr4 24561593 24566862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2174 17 576 MAP Kinase Kinase Kinase AT5G58350 58.524 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Aed4g2174 Pkinase 3.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2174 K08867 - gmx:100778102 1023.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2174 4 24561593 24566862 Aed4g2174 4 24561593 24566862 ECH
Aed4g2174 4 24561593 24566862 Aed3g1939 3 23585216 23589664 PCT