Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2165 ATGAGCGCAAATTCCCCAACTTTGAGATCGGAAAGAATGGACAACGACATTTCCCGGTGGCTCCTGGAGTTTCTCCTCCGCAGTTCCGTCCCCGATTCCCTCATCGCCCTCCCTCTCCCCGCCGCCGATTCCCGCCTAAAAAAAACCCTCCTCCTCCGCACCCTCCAAACCCTCCTCCGCACCGCCACACTCTCGGAAACCGCGCTCAACATCCTCGAAAACCTAGAACCCTCCATCCTTGTGTCCGACGCGCTCCGCCGCGCGTACTGCGCCGTCGCCGTGGAGTGCACCGTCAAGTACCTCACCGCGTACCCCGACGACATCGAAGGGGAGTACGCCGGCGCCGTGGCACGAATCTGGCGCGGCCGCGTGATGGAGCTGGTGGCTCGCCGGAGCGGACTGGTCTCCGGCGAGCTGGTTCGGTGGAGGGTCGACTTCGAGGCTGCGCTTGACGATTCTAGGATTCGCGAGAGGCTTGCGGGGCTGAACAGCCGAAGGGACGCGATGAATGAGGTGAGGGCGTATTTGAAAGAAGCGTGGGAAACGATTGAGCCTTCGATTTTGGAAACGGAAACGGTTGAGGCGATGGAGATGAAGAAGGGTGTAGATTCTCGTGATAGTGATAATACTGATACTAATAATGATAATGATAATGGCAATGGTTTTGGTAATGATAATGATAATGCTGGTGAAGATGATCATGATGATGGTGCATGCATGGAGGATGTGGCAACGCAGCATGATGAGAATCAGGGCAAAGAACCATTGGAAGAGAGAGTTGATGCGAATCAGGAAGTGGGTGGCTCTGACTCAACTCCTCGTACTCGTAGAGTTAAAGTATCAATTCAGAAGCGGAATCCTCAGCTTAAACAAAGACACTCTGCACTTCGTGCATGTCAGAGGGGAGTTAAAATATCTGATCTGGAGGAAGTGGAGTCAGCAAAATCGTGGAGCAAACCTGACCCTGTGCCTAGTCCTGAAGTTAGAAAAGTTCGAGAATCCCTTAAATCAAGTTCTATGGAGTTACGAGCATTGGTCAATGATCCTCTTCCCGAAGCATTGCATATATCTGAAGTTGTAAAATCCAAATTGGTGACAAGTGATACAAAAATTGAGCCACCTACTGAAAATCAAAGTGAAGATGTAGATGTACCAGATCCAAATGTTTGCCAGACTATGGTACTTTTTCAGCCTAATGATGCCAATCTTGGGAAGAAGTCTTCTGTTCATTGTAGTAATATTCATCAGACCAACTTTATAGAACGGAACAGAAGTGCTCGTAGCTCTGAGTGGGATGATTCAATGGACTGCTCGCCCCAAGCAAAACAGCCAAGGAGGAAGAAAAGGAAATGGAGCTCGTTGGAAGAGGAGACACTAAGGGCTGGTGTGAAAATGTTTGGAGAAGGAAACTGGGCGACAATCCGAAGCTTTTACAGTAACATTTTTGACCATAGAAGTGGGGTTGATCTGAAGGACAAGTGGAGAAACATGATACGGTGA 1500 0.4973 MSANSPTLRSERMDNDISRWLLEFLLRSSVPDSLIALPLPAADSRLKKTLLLRTLQTLLRTATLSETALNILENLEPSILVSDALRRAYCAVAVECTVKYLTAYPDDIEGEYAGAVARIWRGRVMELVARRSGLVSGELVRWRVDFEAALDDSRIRERLAGLNSRRDAMNEVRAYLKEAWETIEPSILETETVEAMEMKKGVDSRDSDNTDTNNDNDNGNGFGNDNDNAGEDDHDDGACMEDVATQHDENQGKEPLEERVDANQEVGGSDSTPRTRRVKVSIQKRNPQLKQRHSALRACQRGVKISDLEEVESAKSWSKPDPVPSPEVRKVRESLKSSSMELRALVNDPLPEALHISEVVKSKLVTSDTKIEPPTENQSEDVDVPDPNVCQTMVLFQPNDANLGKKSSVHCSNIHQTNFIERNRSARSSEWDDSMDCSPQAKQPRRKKRKWSSLEEETLRAGVKMFGEGNWATIRSFYSNIFDHRSGVDLKDKWRNMIR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2165 499 MobiDBLite consensus disorder prediction 198 212 - -
Aed4g2165 499 MobiDBLite consensus disorder prediction 424 451 - -
Aed4g2165 499 ProSiteProfiles Myb-like domain profile. 443 498 IPR001005 -
Aed4g2165 499 PANTHER MYB TRANSCRIPTION FACTOR 13 499 - -
Aed4g2165 499 MobiDBLite consensus disorder prediction 198 278 - -
Aed4g2165 499 CDD SANT_TRF 449 499 - -
Aed4g2165 499 Pfam Myb-like DNA-binding domain 448 497 IPR001005 -
Aed4g2165 499 SUPERFAMILY Homeodomain-like 444 498 IPR009057 -
Aed4g2165 499 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 443 499 IPR017930 -
Aed4g2165 499 PANTHER MYB TRANSCRIPTION FACTOR 13 499 - -
Aed4g2165 499 MobiDBLite consensus disorder prediction 239 264 - -
Aed4g2165 499 SMART sant 447 499 IPR001005 -
Aed4g2165 499 MobiDBLite consensus disorder prediction 366 386 - -
Aed4g2165 499 Gene3D - 439 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2165 Aed-Chr4 24440612 24446044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2165 451 498 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 4.28e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed4g2165 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2165 - K11111 gmx:100791258 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2165 4 24440612 24446044 Aed4g2165 4 24440612 24446044 ECH