Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2163 ATGGCCACACAGGCGCAAGATCCACCTTCAAACCCAAACCCTAATCCCAATGCCACGTCCGCAACGCCATCTTCTTCCTTTTTCTTCCGTGCCGGCGGCGTCAACGGCGCCTCCGCCGCTCCCGTCGCCGGCTCCGGCGAGTTGCACTCGCACCACCGAAGGTCACACTCGGAGGTCAGTTTCCGGCTGCCGGACGACATGATGGACCTGTCGACCTCGGATCCGTTCAACGGAGGATCCTCGACGGCGAGCCTTGAGGAGATCGGATCCGAGGACGACCTCTTCTCCACCTACATTGACGTCGAGAAGCTTGGCGGAGTCGCTAACGGCGCCGGCCGCGGCGGAAACGGATCGGATCAGAGTGGTTACGGAAACGGCGCCGGCACGAGTGGTCACAACGACGGCGCGAAGAGTCCGAGCGAAGCCGCGGCGGCATCGCGGCCAAGACACCGGCACAGTTGCTCCGTCGACGGTTCCACGTCGACGAGCATGCTCGGAGAGATCATGGACGCGAAGAAAGCCATGCCTCCGGATAAGCTCGCGGAGCTTTGGAACATTGATCCAAAGCGTGCTAAGAGAATACTGGCTAATCGACAATCTGCTGCACGTTCAAAAGAAAGAAAGGCACGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCTACAACACTTTCTGCCCAACTCACATTGTACCAGAGGGATACAACTGGTTTGAGTTCTGAAAATACCGAGCTTAAACTCCGTCTACAAGCCATGGAGCAACAGGCACAGCTGCGAGATGCTCTTAATGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATGGCTACTGGAGAGGCATTGAACCAATCTGAGTCTTTTAATCTGGGAATGCACCAGATGCCATATGCAGGGTCAAATTTCTTTTCAATCCCACCATATTCAGGTCCTCCTGGTCACCAAAACATGCAAATGCCTCCATTTGGCCACTCCCAATCTTGCGTGGCAACGCATCAGCTGCAGCAGCAAACAAATTCTCACCAAGTGTCAGATATGTTGCAAAACGACCAGCTTGGTCGTTTGCAGGGACTTGACATTAGTAGCAAAGGATCATCACCCATTGTGAAGTCTGAAGACCCTTCAATATCTGCAAATGAGAGTAGCACAACATTTTGA 1170 0.5342 MATQAQDPPSNPNPNPNATSATPSSSFFFRAGGVNGASAAPVAGSGELHSHHRRSHSEVSFRLPDDMMDLSTSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGVANGAGRGGNGSDQSGYGNGAGTSGHNDGAKSPSEAAAASRPRHRHSCSVDGSTSTSMLGEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKMATGEALNQSESFNLGMHQMPYAGSNFFSIPPYSGPPGHQNMQMPPFGHSQSCVATHQLQQQTNSHQVSDMLQNDQLGRLQGLDISSKGSSPIVKSEDPSISANESSTTF 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2163 389 MobiDBLite consensus disorder prediction 114 136 - -
Aed4g2163 389 MobiDBLite consensus disorder prediction 361 389 - -
Aed4g2163 389 PANTHER BZIP TRANSCRIPTION FACTOR 1 386 - -
Aed4g2163 389 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 386 - -
Aed4g2163 389 MobiDBLite consensus disorder prediction 1 84 - -
Aed4g2163 389 MobiDBLite consensus disorder prediction 17 31 - -
Aed4g2163 389 Coils Coil 205 232 - -
Aed4g2163 389 MobiDBLite consensus disorder prediction 47 63 - -
Aed4g2163 389 Pfam bZIP transcription factor 189 247 IPR004827 GO:0003700|GO:0006355
Aed4g2163 389 Gene3D - 189 238 - -
Aed4g2163 389 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Aed4g2163 389 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Aed4g2163 389 MobiDBLite consensus disorder prediction 110 161 - -
Aed4g2163 389 CDD bZIP_plant_RF2 190 239 IPR044759 GO:0003700|GO:0006355
Aed4g2163 389 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2163 Aed-Chr4 24421100 24424957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2163 9 368 bZIP Transcription Factor Family AT2G40620 51.436 2.29e-101 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g2163 bZIP_1 3.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2163 - - gmx:100775607 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2163 4 24421100 24424957 Aed4g2163 4 24421100 24424957 ECH
Aed4g2163 4 24421100 24424957 Aed3g1942 3 23623519 23625978 PCT