Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2161 ATGGAAAAAAATGAACAAAATCTGTCAATGATTTGTTCTCCCCTTAGGCATCACTGGCTTCAAGGGAAAAGGAATAAAGAAGCTGACAACCTTACTGTTTTCGTCCACAACAAATGCAAAAATAATGGTGGCCTTGTCAATGTTAGAAATGCAGCTCAACATTACGGTGGTAATGTGGTTAGAAAACTTATTTTTAATAAAAGGTACTTTGGAAAGGATAGGGAATTAGATGGAGGTCCTGGTTTAGAGGAAATAGAGCATCTAGATGCCCTTTTCACTTTGCGTAAGCACATTTATTCCTTTTATGTTTCTGATTATTTCCCATTCTTGAGAATGTTTGATTTCGATGGCCATAAGGGCAAGGTGAAGAACTCCATGAGAATCATGAAGAAGTATCATGATTCCATCATTGGAGACAGAATCAAGCAATGGAATGATGGATTAAAGACTGTTGAAGAGGACTTGCTGGATGTCATGATCTCACTTAAGGATGTCAATAATAATCCATTATTGACATTGAAAGAAATCGAAGCTCAAATTTTAGATTTGATGCTTGCAACAGCGGACAATCCATCAAACTCTTTTGAATGGACACTTGCAGAAATGATAAACCAACCTGAGTTGCTCCATCAAGTTGTTAAAGAATTAGACAATGTGGTAGGAAAAGAGAGGCTAGTACAAGAATCAGATATACCAAAGCTCAACTATGTGAAAGCTTGTGTAAAAGAAGCTTTTTGCCTTCATCTTACTGCACCTTTTATTCCTTCCTATGTTCCTAAGAAGGACACAATGGTTGGTAATTACTTCATCCTTAAGAATAACCATGTAATTTTAAACAGACAAGGGCTCGGAAGAAATCCAAAAATATTCAAACCTGAACGCCACCTCAATAGTGATGGTTTTGATGTGGCTTTGACAGAACTAAATTTAAAGTTCATATCATTTAGTACAAGAAGGCGTGGCTATGCTGGAGTAATGCTTGGAACCACAATGACTATGATGTTATTTGCAAGGTTGCTTCATGGCTTCACTTGGAGTGTCCCACCCAATGTTTCAATAGTCAACCTTGCTGAGTCAAACGATGATATCCTTCTTGCAGAATCACTTGTGGCAGTTGTTAAACCAAGATTAGCACCAGAGTTATATCAACTTAAAATTAAACGATGA 1167 0.371 MEKNEQNLSMICSPLRHHWLQGKRNKEADNLTVFVHNKCKNNGGLVNVRNAAQHYGGNVVRKLIFNKRYFGKDRELDGGPGLEEIEHLDALFTLRKHIYSFYVSDYFPFLRMFDFDGHKGKVKNSMRIMKKYHDSIIGDRIKQWNDGLKTVEEDLLDVMISLKDVNNNPLLTLKEIEAQILDLMLATADNPSNSFEWTLAEMINQPELLHQVVKELDNVVGKERLVQESDIPKLNYVKACVKEAFCLHLTAPFIPSYVPKKDTMVGNYFILKNNHVILNRQGLGRNPKIFKPERHLNSDGFDVALTELNLKFISFSTRRRGYAGVMLGTTMTMMLFARLLHGFTWSVPPNVSIVNLAESNDDILLAESLVAVVKPRLAPELYQLKIKR 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2161 388 Pfam Cytochrome P450 25 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 11 382 - -
Aed4g2161 388 Gene3D Cytochrome P450 7 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 SUPERFAMILY Cytochrome P450 12 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PRINTS E-class P450 group I signature 195 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PRINTS E-class P450 group I signature 175 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PRINTS E-class P450 group I signature 322 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PRINTS E-class P450 group I signature 273 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2161 388 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2161 Aed-Chr4 24413156 24414914 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2161 10 382 Cytochrome P450 AT4G39950 50.660 9.19e-129 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2161 - K14984 gmx:100809902 531.946