Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2160 ATGGCTCATTCCGTTTTTCTTTTGCTGTCAAATCTTAAAGGCCTTTGGCCTTCTTTGCTTGTTATAGTCACTTGCTTTACCATTATGATGAAAGCCCTAAGGTACAACTTCATTGAGTACTATTCCAACAAGCAAAAGCCAAAACTGCCCCCAGGACCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAACAGACCTGCACATAAGTGGATACACAAGCTCATGAAAGAAATGAACACCGAAATTGCGTGTATCCGCTTAGGTAATGCCCATGTTATCCCAGTGACATGCCCCACCATTGCTAGTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGACCACTAAGCATGTCCAGTGATCTCATCACTAGCGGATATTCAGCCACGATTTTTGTGCCCTTTGGGGATCAATGGAAGAAAATGAAGAAAATCATAAACCATGATTTGCTTTCTCCACAAAAGCACCTATGGCTTCATGACAAAAGGACCGAAGAAGCTGACAATCTTATGCTTTATGTCTACAACAAGTGCAAAAATGTGTACATTAATGGTGCTACTGGCCTTGTGAATATCAGGAGTGCTTCAAGGCATTATTGTGCTAACCTAACTAGGAAAATTATTTTCAACACAAGGTATTTTGGGAAGGGTAGAGAGGATGGAGGACCTGGTTTTGAAGATGAAGAACATGTTGATGCCATCTTCAATTTACTCAACTACATTTATGCTTTTTCTGTTTCTGATTATATGCCATGCTTAAGGGGACTTGACTTGGATGGCCAAAAGAAGAAAGTGAAGGAAGCTTTGAGTATTATCAAGAAATATCACGATCCCATTGTTCAAGAGAGAATTAAACAATGGAATGATGGATTAAAGGTTGATGAAGAGGATTGGCTTGATGTTTTGATCTCTCTCAAGGATGCCAACAATAACCCATCATTGACATTGGAGGAGATCAATGCACAAATTATAGAATTGGTGCTTGCAACAGTCGACAATCCATCAAATGCTTTTGAATGGGCACTTGCTGAAATGATAAACCAACCTAAGTTTCTCAACCGAGCTATTGAAGAATTGGACACCGTGGTAGGGAAAGAGAGGCTGGTCCAGGAATCAGATATACCTAAGCTCAACTATGTGAAGGCTTGTGCGAAAGAAGCTTTTCGCCTTCATCCTATTGCACCTTTTATTCCTCCCCATGTTTCTATGAAGGACACAATAGTTGGCAAGTACTTCATCCCTAAAGGTAGCCATGTAGTGCTAAGCAGACAAGAGCTTGGGAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAATCCTGAACGCCACCTCAAGAGTGATGGGTCTGATGTGATTTTGACAGAACCCAATTTGAAGTTCATGTCATTTAGCACAGGAAGGCGTGGCTGTCCTGGAGTGATACTTGGAACCACAATGACTGTGATGTTATTTGCGAGATTGCTTCATGGATTCCTTTGGAGTGCACCACCTAATGTTTCAATAATCAACCTTGCTGAATCAAACGATGATATCCTTCTTGCAGAACCACTTGTTGCAGTTGCTAAACCAAGATTAGCACCAAAGTTATACCAACTTTAA 1617 0.41 MAHSVFLLLSNLKGLWPSLLVIVTCFTIMMKALRYNFIEYYSNKQKPKLPPGPKPWPIVGNLPEMLANRPAHKWIHKLMKEMNTEIACIRLGNAHVIPVTCPTIASEFLRKQDATFASRPLSMSSDLITSGYSATIFVPFGDQWKKMKKIINHDLLSPQKHLWLHDKRTEEADNLMLYVYNKCKNVYINGATGLVNIRSASRHYCANLTRKIIFNTRYFGKGREDGGPGFEDEEHVDAIFNLLNYIYAFSVSDYMPCLRGLDLDGQKKKVKEALSIIKKYHDPIVQERIKQWNDGLKVDEEDWLDVLISLKDANNNPSLTLEEINAQIIELVLATVDNPSNAFEWALAEMINQPKFLNRAIEELDTVVGKERLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMKDTIVGKYFIPKGSHVVLSRQELGRNPKVWNEPYKFNPERHLKSDGSDVILTEPNLKFMSFSTGRRGCPGVILGTTMTVMLFARLLHGFLWSAPPNVSIINLAESNDDILLAEPLVAVAKPRLAPKLYQL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2160 538 Gene3D Cytochrome P450 42 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 SUPERFAMILY Cytochrome P450 50 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 17 536 - -
Aed4g2160 538 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Aed4g2160 538 Pfam Cytochrome P450 50 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2160 538 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 17 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2160 Aed-Chr4 24408593 24410662 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2160 2 536 Cytochrome P450 AT4G39950 52.239 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2160 - K14984 gmx:100809902 936.021