Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2156 ATGATCGAAGTGGTGGACAATCCAGCACATGCAAGTGAATGGGCTCTAGCAGAAATGATAAACCAGCCTGAATTGCTTAAAAAATCTACAGAAGAATTAGACAATGTGGTAGGTAAGAAGAGGATGGTCCAAGAATCAGATATTCCTAAGCTCAACTTTGTGAAGGCTTGTGCAAAAGAAGCTTTTCGCCTTCATCCCACCGTGCCTTTCATTGTTCCACATTTGTGTATGAAGGACTCAGTGGTAGCCAATTACCTGATCCCAAATGGCAGCCATGTGCTACTAAGTAGAAGGGGTCTCGGTAGAAACCCAAAGTGTGGAATGATGAACCCCTCGATCAAGTTCAAGCCACAACGACACTTGAAGAGTGACGGGTCTGATATGGTTTTGACAGAACCAGATTTAAGGTTTGTAACATTTAGCACTGGAAGACGTAGTTGTCCTGGAGCCATGCTTGGTACCACGATGACTGTGATGTTATTCGCTAGGTTGCTCCATTCCATGCCTTCACTTGGACTGCACCACTTTCTAATGTCTCGATAA 543 0.442 MIEVVDNPAHASEWALAEMINQPELLKKSTEELDNVVGKKRMVQESDIPKLNFVKACAKEAFRLHPTVPFIVPHLCMKDSVVANYLIPNGSHVLLSRRGLGRNPKCGMMNPSIKFKPQRHLKSDGSDMVLTEPDLRFVTFSTGRRSCPGAMLGTTMTVMLFARLLHSMPSLGLHHFLMSR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2156 180 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 167 - -
Aed4g2156 180 Pfam Cytochrome P450 2 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PANTHER P450 FAMILY PROTEIN, PUTATIVE-RELATED 1 167 - -
Aed4g2156 180 SUPERFAMILY Cytochrome P450 6 167 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS P450 superfamily signature 56 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS P450 superfamily signature 21 34 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS P450 superfamily signature 138 147 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 140 149 IPR017972 GO:0005506|GO:0016705
Aed4g2156 180 Gene3D Cytochrome P450 1 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS E-class P450 group I signature 137 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS E-class P450 group I signature 147 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2156 180 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2156 Aed-Chr4 24383216 24383758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2156 6 166 Cytochrome P450 AT2G22330 59.627 5.08e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2156 - K14984 gmx:100785254 255.373