Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2152 ATGAAAGACACCATGGAAACTCCGATGACACTCACCACCTTGCTGCGCCACGTCGCCGTCAAATTCCCCTCCCGCCGCGCCATCTCCGTCGCCGGAAAATTCGACCTCACCCACTCCTGCCTCCACGGCTTGGTCGAATCCGCCGCCGTTCGCTTGGTTGCCGCCGGCATCAAACCCGGCGACGTCGTCGCCCTCACCTTCCCAAACACCATCGAGTTTGTTGTCATGTTCCTAGCCGTCATTCGAGCGCGAGCCACAGCCGCGCCGTTAAACCAAGCATACACAGCGGAAGAGTTTGAGTTTTACTTATCCGATTCCGAGTCCAAGATTCTGCTAACATCATCGGAAGGAAACAATCCGGCTCAAGCCGCGGCTTCAAAACTGAACATCCCTCACGCCGCGGCTTCGATCACCCAAGCCGAGAACCAGGAAGCCGAGCTGAGTCTCTCGTTGAGCCACTCCGATTCGGTTGATTCGGTTGAGTCACTCATTAACGACCCTACTGACGTGGCGCTTTTCCTTCACACCTCTGGCACCACGAGCCGTCCCAAGGGGGTGCCGCTGACTCAGCACAACCTGCTCTCTTCGGTGAAGAACATCGACTCGGTGTACCGACTCACTGAGTCCGACTCGACGGTGATCGTGCTTCCGCTCTTCCACGTGCACGGGTTAATCGCGGGTTTGCTGAGTTCCCTTGGCGCCGGCGCGGCGGTGGCGCTGCCGGCGGCGGGGAGGTTCTCCGCGTCGGCTTTCTGGAAGGACATGGTGAAGTACAACGCGACGTGGTACACCGCGGTTCCCACCATACACCAGATCATACTGGATCGGCACTCGAACAACCCCGAACCGGTTTACCCACGGCTCCGGTTCATCCGAAGCTGCAGCGCGTCGCTAGCACCGGTTATTCTGGGTAAGCTCGAGGAGGCTTTCGGTGCCCCGGTTTTAGAGGCTTATGCGATGACGGAAGCGTCGCATTTGATGGCTTCAAACCCTTTGCCGCAAGATGGGTCCCACAAGGCCGGGTCGGTTGGGAAGCCCGTGGGGCAGGAAATGGCCATATTGGACGAATCGGGTCATGTCCAGGAGGCTGGAGTCAGCGGAGAGGTTTGCATTCGGGGACCCAATGTGACGAAAGGATATAAAAATAACGTGGCAGCGAATACGGCGTCGTTTTTGTTTGGTTGGTTTCATACCGGTGATATTGGATTCTTTGATTCTGATGGGTATTTGCATCTCGTGGGTCGGATCAAGGAGCTAATCAACCGTGGAGGTGAAAAGATATCACCAATAGAAGTGGACGCTGTCCTTCTTTCACATCCAGACATTGCTCAAGCAGTTGCTTTCGGAGTGCCTGATGCCAAGTATGGGGAAGAGATATATTGTGCTGTCATCCCAAGAGAAAGATCAAACATTGATGAGGCAGAGGTGCTAACATTTAGCAAGAAGAATCTTGCATCCTTCAAAGTCCCCAAAAAGGTCTTCATTACTGATTCTTTGCCCAAGACTGCCACAGGGAAGATTCTGCGCCGTCTTGTGGGAGAACACTTCGTCTCTCAAATTTGA 1563 0.5483 MKDTMETPMTLTTLLRHVAVKFPSRRAISVAGKFDLTHSCLHGLVESAAVRLVAAGIKPGDVVALTFPNTIEFVVMFLAVIRARATAAPLNQAYTAEEFEFYLSDSESKILLTSSEGNNPAQAAASKLNIPHAAASITQAENQEAELSLSLSHSDSVDSVESLINDPTDVALFLHTSGTTSRPKGVPLTQHNLLSSVKNIDSVYRLTESDSTVIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASAFWKDMVKYNATWYTAVPTIHQIILDRHSNNPEPVYPRLRFIRSCSASLAPVILGKLEEAFGAPVLEAYAMTEASHLMASNPLPQDGSHKAGSVGKPVGQEMAILDESGHVQEAGVSGEVCIRGPNVTKGYKNNVAANTASFLFGWFHTGDIGFFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDAKYGEEIYCAVIPRERSNIDEAEVLTFSKKNLASFKVPKKVFITDSLPKTATGKILRRLVGEHFVSQI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2152 520 Pfam AMP-binding enzyme C-terminal domain 431 506 IPR025110 -
Aed4g2152 520 CDD FACL_fum10p_like 23 514 IPR045310 GO:0016874
Aed4g2152 520 ProSitePatterns Putative AMP-binding domain signature. 173 184 IPR020845 -
Aed4g2152 520 Gene3D - 9 415 IPR042099 -
Aed4g2152 520 PANTHER ACYL-COA SYNTHETASE 5 520 - -
Aed4g2152 520 SUPERFAMILY Acetyl-CoA synthetase-like 8 518 - -
Aed4g2152 520 Gene3D - 416 518 IPR045851 -
Aed4g2152 520 PANTHER OXALATE--COA LIGASE-LIKE 5 520 - -
Aed4g2152 520 Pfam AMP-binding enzyme 16 422 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2152 Aed-Chr4 24355916 24358567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2152 10 520 Monolignol Biosynthesis Gene Families AT4G05160 31.120 6.40e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2152 K22133 - gmx:100817853 891.723