Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2145 ATGAAGGCCGGCAAAGTTTACTCCAAATTTACTGGTCAATATCTTATTCCTAACAGCAAACAACGCTCCATGAAGTTCTGTTCAAGTTCAGTGGCATCGTTTCTTTTTGTCACAGTTATTCTTTTTCCTCTAGCTATTGCTGATCTAAGTTCAGATAAGCAAGCCCTTCTTGATTTTGCTAATGCTGTCCCCCACCGCCGAAACCTTATGTGGAATCCATCCACCTCAGTCTGTACATCTTGGGTAGGCATCATTTGCAATGAAAATAGAACCCGTGTTGTTAGAGTTCGGCTCCCTGGAGTTGGACTAGTTGGCACCATCCCATCCAATACACTTGGCAAGCTTGATGCTGTGAAAACTATCAGCCTTCGCTCCAACCTACTTAGTGGAAATCTTCCTGCTGACATTGCTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCTTCCCAACTTGTTGTACTTGATTTGTCATACAACTCCTTCACTGGTGTTATTCCAATGACATTTCAAAATTTTTCAGAATTAACTAGTTTGAATCTCCAGAACAACTCCCTATTCGGACAGATACCTAATCTCAATGTCACTCAGCTCAAGCTTTTGAATTTAAGCTACAACCATTTGAATGGCTCAATTCCTAAAACTCTTCAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCTCTCTTATGTGGACCACCTCTAAAGCCATGCTCAGTGGTTCCCCCTACACCTTCTCCTGCATCAACCCCATCTCCATCAACTCATGGAAGAAAAAGCTCAAAGAACAAGCTGAGTAAAATAGCTATCATGGCAATTGCTGTTGGAGGAGCCGTGGTGCTATTCTTTGTTGCTCTTGTTATTGTTATTTGCTGTTTAAAGAAGGTAGATGACGGAGGCTCCAATGTAACTAAAGGAAAGGGTCCTAGTGGTGGTAGGGGTGAGAAGCCAAAAGAAGAGTTTGGGAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCAGTTCTTATAATTTTGATCTTGAAGATTTGCTGAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGCTATGGTACTGCTTATAAGGCCATACTGGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGCAAGAAGGACTTTGAACAACAGATGGAGATTATGGGAAGAGTTGGACAACACACAAATGTTGTGCCACTTCGCGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTATATGACTATGTCCCTGGTGGCAACCTACACACACTCTTGCATGGTGGTAGGACAGGTGGAAGAACTCCATTAGACTGGGACTCTCGAATAAAAATATCCCTTGGAACAGCCAAAGGACTTTCCCACATTCATTCTGTTGGTGGTCCAAAATTCACACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAACCATGATAATGATGGCTGCATTTCTGACTTTGGCCTTGCCCCCCTTATGAATGTTCCTGCTACCCCTTCTAGAGCTGCAGGTTATCGTGCACCTGAGGTGATTGAAACCCGCAAACACTCTCATAAATCTGATGTGTACAGCTTTGGCGTCCTCCTTCTTGAGATGCTTACCGGGAAGGCTCCTCTCCAATCTCCGGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTCGTTAGGGAAGAGTGGACGGCCGAAGTTTTTGATGTGGAGCTAATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGCATGGATGAAGCAGTGAGAATGATAGAAGAGATCCGGCTATCTGACTCAGAAAACCGACCATCTTCTGAAGAAAATAAATCTAAGGACTCAAATGTTCAGACTCCATAG 1974 0.4311 MKAGKVYSKFTGQYLIPNSKQRSMKFCSSSVASFLFVTVILFPLAIADLSSDKQALLDFANAVPHRRNLMWNPSTSVCTSWVGIICNENRTRVVRVRLPGVGLVGTIPSNTLGKLDAVKTISLRSNLLSGNLPADIASLPSLQYLYLQHNNLSGDIPASLSSQLVVLDLSYNSFTGVIPMTFQNFSELTSLNLQNNSLFGQIPNLNVTQLKLLNLSYNHLNGSIPKTLQIFPNSSFEGNSLLCGPPLKPCSVVPPTPSPASTPSPSTHGRKSSKNKLSKIAIMAIAVGGAVVLFFVALVIVICCLKKVDDGGSNVTKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMEIMGRVGQHTNVVPLRAYYYSKDEKLLVYDYVPGGNLHTLLHGGRTGGRTPLDWDSRIKISLGTAKGLSHIHSVGGPKFTHGNIKSSNVLLNHDNDGCISDFGLAPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEAVRMIEEIRLSDSENRPSSEENKSKDSNVQTP 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2145 657 CDD STKc_IRAK 368 633 - -
Aed4g2145 657 MobiDBLite consensus disorder prediction 633 648 - -
Aed4g2145 657 MobiDBLite consensus disorder prediction 633 657 - -
Aed4g2145 657 Gene3D Ribonuclease Inhibitor 49 205 IPR032675 -
Aed4g2145 657 ProSiteProfiles Protein kinase domain profile. 362 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2145 657 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Aed4g2145 657 Pfam Protein kinase domain 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2145 657 PANTHER LRR RECEPTOR-LIKE KINASE 16 657 - -
Aed4g2145 657 Gene3D Ribonuclease Inhibitor 206 251 IPR032675 -
Aed4g2145 657 ProSitePatterns Protein kinases ATP-binding region signature. 368 399 IPR017441 GO:0005524
Aed4g2145 657 PANTHER OS05G0588300 PROTEIN 16 657 - -
Aed4g2145 657 MobiDBLite consensus disorder prediction 253 272 - -
Aed4g2145 657 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Aed4g2145 657 Gene3D Transferase(Phosphotransferase) domain 1 438 656 - -
Aed4g2145 657 SUPERFAMILY L domain-like 51 250 - -
Aed4g2145 657 MobiDBLite consensus disorder prediction 323 337 - -
Aed4g2145 657 Pfam Leucine rich repeat 106 152 IPR001611 GO:0005515
Aed4g2145 657 MobiDBLite consensus disorder prediction 314 337 - -
Aed4g2145 657 Pfam Leucine rich repeat N-terminal domain 50 87 IPR013210 -
Aed4g2145 657 Pfam Leucine Rich Repeat 164 185 IPR001611 GO:0005515
Aed4g2145 657 SUPERFAMILY Protein kinase-like (PK-like) 366 639 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2145 Aed-Chr4 24311791 24316611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2145 23 655 Receptor kinase-like Gene Family AT5G58300 66.197 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed4g2145 Pkinase 4.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2145 - - gmx:100796171 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2145 4 24311791 24316611 Aed4g2145 4 24311791 24316611 ECH
Aed4g2145 4 24311791 24316611 Aed3g1957 3 23730669 23735520 PCT