Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2131 ATGCAGCTCCAATTTGATTCCCAGTTTTTCATGTCCATTGTGTTTCTTGGCTTTGTTGGATTGTTGTGTCGTTTGTACTCTTCCTTGGTGGAGAAGCCAAATAGGCTTCGTTCTAAGCTAATGAAGCAAGGTATCAGTGGTCCACCTCCAACTATACTGCTTGGAAATATTGTGGACATGAAGAAAGCTCGCTCTACCACTTCAAATTCTACTTCATCTGAACCACCTGCATCTCACAACTGTGCTTCTGTTCTCCTTCCTTTGTTTGATAAATGGAGGGAACAGTATGGTGAAGTGTTCATGTTTTCTCTTGGGAACAGACAAATACTGTGTGTGAGCCAGGCTGACATAGTGAGAGATATTACCACATGCACATCCTTGGACTTGGGGAAGCCTTCGTATCAACAGAAACAACTAGGGCCTTTGCTGGGTCAGGGTGTTTTAACATCAAATGGAACTACATGGGTTCATCAAAGAAAAATCCTAGCTCCAGAACTATACATGGAAAAGGTTAAGGGAATGATGAATGTGATTAGTGAGTCTGCTATATCTCTGCTAAACTTGTGGAACAGTAGAATTGAAGCAGATGGTGGAGTTGCTGACATAAAAATTGATGAGTACATGAGAAATTTCTCTGGGGATATTATTTCAAGAGCATGCTTTGGAAGCAATTATTCCAAGGGGGAAGAAATTTTCTTGAAACTTGGAGCTCTCCAAGAGATCATGTCCTGGAAAAATGTATCCATAAGGGTCCCTGGCATGAGATACCTTCCAACAAAGACCAATAGAGAAACATGGAGATTAGAAAAAGAGGTGAAAAAATTGATACTCCAGGAGGGAGTGAAGGAAAGAAAGGAAACTAGTTTTGAGAAGGACTTGCTGCAAATGGTTCTCGAAGGTGCTAAGAATAGTAATCTAAGTCAAGAAGCCAGTGACCGTTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGGTATGAGACAACTGCAGTTGCAGCTACATGGTGCCTGATGTTGCTGGCCTCAAATCAAAATTGGCATGATCGTGTTCGCGCTGAGGTGCTAGAAATTTGCAGGGGTAGAATCCCAGATTTTAATATGCTTTGTAAGATGAAGCAGCTAACAATGGTTATTCATGAATCATTACGCCTTTACCCCCCTGTAGCTGTGGTGTCAAGGCAAGCCTTGAAGGACATGAAATTTGGTAACATTGATGTCCCAAAAGGCTTTAATATTTGGATAATGGTGGCAACTTTGCATACAAATCCAGATATGTGGGGTGCTGATGCCAACAAATTCAACCCAGAAAGATTTGCAAATGGAACCATAGGTGCTTGTAAGTTGGCACACATGTACACGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGCTCATAGCTCTCATCTTCTCCAAATTTACTTTCTCCCTCTCTCCGCGATACGTTCATTCGCCTACTCTTAGGTTGCTCATAGAGCCTGAGCATGGAGTTCATCTCTTGGTGAAAAAACTATGA 1548 0.4186 MQLQFDSQFFMSIVFLGFVGLLCRLYSSLVEKPNRLRSKLMKQGISGPPPTILLGNIVDMKKARSTTSNSTSSEPPASHNCASVLLPLFDKWREQYGEVFMFSLGNRQILCVSQADIVRDITTCTSLDLGKPSYQQKQLGPLLGQGVLTSNGTTWVHQRKILAPELYMEKVKGMMNVISESAISLLNLWNSRIEADGGVADIKIDEYMRNFSGDIISRACFGSNYSKGEEIFLKLGALQEIMSWKNVSIRVPGMRYLPTKTNRETWRLEKEVKKLILQEGVKERKETSFEKDLLQMVLEGAKNSNLSQEASDRFIVDNCKNIYLAGYETTAVAATWCLMLLASNQNWHDRVRAEVLEICRGRIPDFNMLCKMKQLTMVIHESLRLYPPVAVVSRQALKDMKFGNIDVPKGFNIWIMVATLHTNPDMWGADANKFNPERFANGTIGACKLAHMYTPFGVGPRVCLGQNLAMVELKMLIALIFSKFTFSLSPRYVHSPTLRLLIEPEHGVHLLVKKL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2131 515 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 Pfam Cytochrome P450 89 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Aed4g2131 515 PANTHER CYTOCHROME P450 714C2 12 509 - -
Aed4g2131 515 SUPERFAMILY Cytochrome P450 82 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed4g2131 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2131 Aed-Chr4 24194725 24197003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2131 117 512 Cytochrome P450 AT5G24900 43.873 7.15e-126 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2131 K24544 - gmx:100785420 950.273