Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2120 ATGGTTTTTAAGGTACTCGACCTGAGTAACACAAAATTTGTTGTAAATAAGGACGCATTCATCAACAAAGGCAACAGAAACCAAGATTTCTCTGATGCAAGCGTTCTCAGCGGGAACACCACCGAAACATCCTATGATGCAGTTTCAAGCAGAAGGAAGAGGAATAGTCAAATGATACCATCTGATCATGCAGCAGGCTTTAACAATACTAGCTCTTCATCAGTTTTACGCATCTGGGAACATATGAAGAATACGCCTATCGGACATTTCACACGTCAGCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCGGGATCACCCTCGCCCTCTGTCCAGTATATCTCCTCCTCGGGATCATCCTCGCCCTCTAAGGGAAACCATCACAATTGTTGAGGGAATAAACAAAATTTTCAATCATCACAAGATACTCAGGGACCTCAGGGAAGAATTTGGCTGTAATGGTCGTGTTGTCATGGACAGTGACTTTGGCAAGGTCATAGAACTTTTCGGTGATCAAAGAAGGATTGTAGCTTGTTTCCTTGTGGAGGTTGGCATAGTAAAGAGGAACCATCTCATGATTCATGGTTTTCTTTAA 597 0.4389 MVFKVLDLSNTKFVVNKDAFINKGNRNQDFSDASVLSGNTTETSYDAVSSRRKRNSQMIPSDHAAGFNNTSSSSVLRIWEHMKNTPIGHFTRQPPPPPPPPSPPRDHPRPLSSISPPRDHPRPLRETITIVEGINKIFNHHKILRDLREEFGCNGRVVMDSDFGKVIELFGDQRRIVACFLVEVGIVKRNHLMIHGFL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2120 198 MobiDBLite consensus disorder prediction 90 117 - -
Aed4g2120 198 CDD eIF1_SUI1 125 196 IPR005874 GO:0003743
Aed4g2120 198 MobiDBLite consensus disorder prediction 86 123 - -
Aed4g2120 198 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 122 197 - -
Aed4g2120 198 MobiDBLite consensus disorder prediction 24 68 - -
Aed4g2120 198 SUPERFAMILY eIF1-like 125 197 IPR036877 GO:0003743|GO:0006413
Aed4g2120 198 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 122 197 - -
Aed4g2120 198 Pfam Translation initiation factor SUI1 125 186 IPR001950 GO:0003743|GO:0006413
Aed4g2120 198 ProSiteProfiles Translation initiation factor SUI1 family profile. 115 185 IPR001950 GO:0003743|GO:0006413
Aed4g2120 198 Gene3D - 118 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2120 Aed-Chr4 24141402 24143358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2120 118 197 Eukaryotic Initiation Factors Gene Family AT4G27130 50.000 2.85e-25 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2120 K03113 - cmk:103180830 76.6405