Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2112 ATGCCAGGGACCCAGAAGAAGAAGCCGCCGGGAATTGAACCGCCGGACGACCTCCGTTGCCGTCGCAGCGACGGAGCCTCGTGGCGGTGCAAACACTGGCGGATTCATGACCAGAGTTACTGCGAGGATCACTTCCTTACAATTACCATCCGAGCCAGGTCCTCCGAACCAAGGAATAAGAAGAAGAATAAACAACAACCTAGGGCTTCTACTTCTTCTGCTTCTGCTTCGGCGCGAAGAGACAATGCGAATAAGAATTCGAAGAAGAGGCTTCGAGACCGAGAACGAGACGAAGAAGAGACTACTGTTCCGGAGAAAGCAAAACACAAGAAGGTGAAACTCGAAGCGGAACCAGCATTACCGGACAGGAAAGCCAGGAGCAGAGAGAAGATCAAGCAAATGCTTATGCAATTGGACGATGATTTTGAAATCGACGACAAAAAATCGGTCAAAACGACGAGGACAACAAAGTTGATGCCTTCTTCTTCCGCCAAGTCTAGCGGCGCGAAGACGAAAGCCTCTGTTTATGAGTCTCAGATGTGTCACCAGTGCCAGAAAAGTGATAGGACTGTTGCTCGCTGTCGGAACTGTGCAAAACGATTTTGCGTCATTTGCATTCAGAGATGGTATTCACAAATGTCCAAGAAGGAAATAGAAGAATCCTGTCCATATTGTCAAGGCAATTGTAATTGCAAGGCATGTTTACGTAGAAAAGATGTAAATGCTGATTCTGGAGATTTAGGAGTGCCTCAAAATGAAGATGAAAAGATTCGACATCGGAAGCATTTGGTGCGAGCTTTGTATCCTTTTCTGGAACAACTTAATCATGAGCAGCAGTTGGAATTGGAGATGGAAGCAAAAATTAAAGGGTTATTGCTTTCTGATGTACAAGTTAAGAGAATTGTTTGTTCTGAATATGAGCGCATTTATTGGTTAGTTTCTTTCCAAAATTATTTTATTGTACTTATCATGAATTGCTGTTTTTTACCTCATTGTCAATTACCCAATGCTATTGGCTATCACTGCAGCAACAATTGCAAAACCTCTATTATTGATTTTCATAGGAGCTGCCCAAATTGTTCGTATGATCTTTGCCTTACTTGTTGCCGGGAAATTCGTGGCAATTTCTTGCCAGGGGGAATAGTTGAGCCGTGTATTGATGTTTCTAATGCTCATTCACATAGTGCAGAGCATTTAGATCCGCACTCATGTAAAAAAGAATCATCAGACATTTGTCTTGAATTGAGCTCTGTTAGACCAAATCATTTGTGGAGGGCTATGAAAAATGGTGCAATCCCCTGTCCTCCAGAGGATAATGGTGGTTGTGGGTATGAATGTCTTGAGCTGAAGTGTATATTACATCAAAGTTGGATTTCAGAGTTAAGGGAAAAAGTGAAAAGATTAATTGAAGTACATGGACTAGAAGATATGCCCACAGTTTCTGCACGGTGTAATTCCTGCTTCAAATCCCATGATGAAATTGACTCCATCAATGAGAAGTTGCGAAGAGCTGCCACTCGAGAAGGCTCTAATGACAACTATTTGTATTGTCCTTCCGCTAGTGATGTTGAATGTGGGGATCTGGAACATTTTCAGGGCCATTGGATTAAGGGAGAACCGATTATTGTTAGGAATACTCTTGAGTTAACTTCTGGCTTGAGCTGGGAACCAATGGTAATGTGGCGTGCAATGCGTGAACTGACATGTCATGGTTCCAAACATTTGAATGTGAGAGCAATTGATTGCCTAGATTGGTGTGAGGTTGAAATAAATATCCATCAATTTTTCAAGGGATACTCAGAGGGTCGTGCTCATCGTGACGCCTGGCCTGAGATGCTCAAGCTCAAAGATTGGCCTCCGTCTAATCTATTTGAGCAGAGGTTACCACGTCATGGTATGGAGTTTATTAGGGCCTTACCTTACAAAGAGTATACACATCCTCACACTGGTTTTCTTAACATGGCCACAAAGCTACCGGAAGAGTCTTTGAAACCTGACTTGGGGCCAAAGACGTATATAGCATATGGCTTTGCTGAAGAGCTTGGACAGGGAGATTCTGTAACCAAGCTTCATTGTGACATGTCAGATGCGGTAAATATTTTGACGCATACGGAAGAGGTGACACTCACTTCTCAACATCTTAACAGAATAGAGACGTTGAAACAAAAATATGCCGTAGAAGATGACCTAAGTGAACTTTTTAAGCTTTTGCAGAATGATTCTGTAGTGAAGTGCAAATCAACATTAGAAGAAAATATTTCATTGCAGGTAGCAGATGATTTGTCACTTCTTAATGGGTCTTCTCTTACCCAAATGTCAAAAATGGAAAATGATGGGCCCTGCAGAAAGCATGCAACTGCTAAACCACCAAATGATAGCATTCTTGAAAAGAATGGTAAGGCTGTGGCTTCTGATGGAGAACCAAGTTCTTCTACACCCAGAGTTGAAGTTCTAGTGAATTCAGGGACTTCATTGGAAAGGGAAACTAGTGAAACGATAAACTCTGAAGAAGGGAATGTAATTATTGAGAGGGAAATTGTATTCAAATCACCGTGTGATTTAGATATGAAGTCAGAATTATATGACGTGAAAAAATCTAATGCTGTTTTTTCCAACATGCATACTTCAACGAATGAGGTGCTGCAGCAAACTGCTGGATGTATTAGTCAATCTCTTGACTCTGGAAATATGCATAGTGGACAAAAATTTGCCAAGGGAGGTGCTGTCTGGGATATTTTTCGGAGGCAAGATGTGAGCAAGCTTGAAGAATACCTGAGGAAGCATTGTAGAGAATTCAGGCATCTCCGTGGTTCTCAAGTGGAGGAGGTTTTTCACCCCATTCATGATCAAGTTTTTTATCTGACTTCTCATCATAAAAGGAAGCTCAAGGAAGAATTTGGAGTTGAACCTTGGACTTTTATACAAAACCTTGGGGAGGCTGTTTTTATACCTGCCGGGTGTCCCCATCAAGTTAGAAACTTAAAGTCGTGCATAAAGGTGGCTCTTGATTTTGTCTCTCCTGAAAATATTCAAGAGTGTATCCGTCTGACCGAGGAATTCCGTACTCTTCCTCCAAGCCATAAAGCAAACGAAGATAAACTTGGGGTGAAAAAAATGTGTCTCTATGCATTAAGCGAGGCTGCAGACTCTTTGGTGCAGCACAGCTCAAAGGATGATTAG 3180 0.4204 MPGTQKKKPPGIEPPDDLRCRRSDGASWRCKHWRIHDQSYCEDHFLTITIRARSSEPRNKKKNKQQPRASTSSASASARRDNANKNSKKRLRDRERDEEETTVPEKAKHKKVKLEAEPALPDRKARSREKIKQMLMQLDDDFEIDDKKSVKTTRTTKLMPSSSAKSSGAKTKASVYESQMCHQCQKSDRTVARCRNCAKRFCVICIQRWYSQMSKKEIEESCPYCQGNCNCKACLRRKDVNADSGDLGVPQNEDEKIRHRKHLVRALYPFLEQLNHEQQLELEMEAKIKGLLLSDVQVKRIVCSEYERIYWLVSFQNYFIVLIMNCCFLPHCQLPNAIGYHCSNNCKTSIIDFHRSCPNCSYDLCLTCCREIRGNFLPGGIVEPCIDVSNAHSHSAEHLDPHSCKKESSDICLELSSVRPNHLWRAMKNGAIPCPPEDNGGCGYECLELKCILHQSWISELREKVKRLIEVHGLEDMPTVSARCNSCFKSHDEIDSINEKLRRAATREGSNDNYLYCPSASDVECGDLEHFQGHWIKGEPIIVRNTLELTSGLSWEPMVMWRAMRELTCHGSKHLNVRAIDCLDWCEVEINIHQFFKGYSEGRAHRDAWPEMLKLKDWPPSNLFEQRLPRHGMEFIRALPYKEYTHPHTGFLNMATKLPEESLKPDLGPKTYIAYGFAEELGQGDSVTKLHCDMSDAVNILTHTEEVTLTSQHLNRIETLKQKYAVEDDLSELFKLLQNDSVVKCKSTLEENISLQVADDLSLLNGSSLTQMSKMENDGPCRKHATAKPPNDSILEKNGKAVASDGEPSSSTPRVEVLVNSGTSLERETSETINSEEGNVIIEREIVFKSPCDLDMKSELYDVKKSNAVFSNMHTSTNEVLQQTAGCISQSLDSGNMHSGQKFAKGGAVWDIFRRQDVSKLEEYLRKHCREFRHLRGSQVEEVFHPIHDQVFYLTSHHKRKLKEEFGVEPWTFIQNLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENIQECIRLTEEFRTLPPSHKANEDKLGVKKMCLYALSEAADSLVQHSSKDD 1059
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2112 1059 MobiDBLite consensus disorder prediction 775 815 - -
Aed4g2112 1059 SUPERFAMILY Clavaminate synthase-like 522 1041 - -
Aed4g2112 1059 MobiDBLite consensus disorder prediction 66 81 - -
Aed4g2112 1059 CDD cupin_RmlC-like 944 1005 - -
Aed4g2112 1059 Pfam WRC 15 51 IPR014977 -
Aed4g2112 1059 Gene3D Cupin 857 1030 - -
Aed4g2112 1059 Gene3D Cupin 514 756 - -
Aed4g2112 1059 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 11 1051 IPR045109 GO:0032454|GO:0033169
Aed4g2112 1059 ProSiteProfiles JmjC domain profile. 647 1021 IPR003347 -
Aed4g2112 1059 MobiDBLite consensus disorder prediction 1 24 - -
Aed4g2112 1059 ProSiteProfiles Zinc finger RING-type profile. 181 226 IPR001841 -
Aed4g2112 1059 Pfam JmjC domain, hydroxylase 903 1004 IPR003347 -
Aed4g2112 1059 MobiDBLite consensus disorder prediction 52 128 - -
Aed4g2112 1059 MobiDBLite consensus disorder prediction 10 24 - -
Aed4g2112 1059 ProSiteProfiles WRC domain profile. 14 58 IPR014977 -
Aed4g2112 1059 MobiDBLite consensus disorder prediction 82 128 - -
Aed4g2112 1059 SMART cupin_9 628 1021 IPR003347 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed4g2112 Aed-Chr4 24108122 24114823 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed4g2112 JmjC 1e-13 CL0029
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2112 K15601 - gmx:100808936 1202.19