Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2099 ATGCAAGTAGGATACAACAACTTGCACACTTGTCTTCCCAACACAGAGGGTAGTGCATATGATGCTGGCTGTTTTATGAAATACTCCACCACACCCTTCTTTTCTGATAACCAGATCATTGATATCACGCCCTATTTAGATCAAGTTGGAAGTCCACAGACACATGAAGTCAACAAGGGGTGCAGCACATACAAGCAGGAAACGAACTTGCCTAACTTCTTGGCCAACATCAATGACACGTTTTCGAGCCTGAGAGCACAAATTAGCAATGAGACAAACAAGCATTTTGCCAAAGCATATAAAGCCAGTGGAGAGGTGCTAGCATATGCCATGTTTCAATGCAGAAACTATCTCTCCAAAAATAACTGTCTTGCTTGCTTCGACACTGCCTCCACCCAAATCCGAACCTGCTCTACTTCCAACGGTGCCAGAATCATATACGACGGCTGCTTCCTCAGGTACGAGAGCCGTAGGTTTGACTATGAGACCAATACAGAAGGGGGTGGTGCATCATGTGGGAACACGACTGTAAAGGTTGATGCAGGTTTTAGAGCAGCTCGAGAAAAAGTGCTATTGGAGCTCCAAACGGCAACACCAACAATGGAAGGTTTTTATGCAGCTACTAAGACACGGGTGGATGGTGATAGTGCAATTTATGCTGTTGCACAATGTGTTGAAAGTGCCGCAGAGAGTGATTGTTTGAAATGCATGCAAATTGGATACAACAGCTTACAAAATTGTATTAACAGCACAGAGGGTAGAGCATTTGATGCTGGCTGTTTTATGAGATACTCCACCTTACCCTTCTTTTCAGATAACCAGACCACTGCTATCACACCACCCACACCCTATTTAAAACAAGGAGGCTCAAGAAGAAAGAAGTGGGCCATTATATGTGGTGTTGTTGGAGGTGTTGGTATTCTCATTGTCATGCTTCTTGCATTGGTTACATGGCAAAGATACAAAAAACCTAAGAGTCTTCCTAGAGAACAGGGTACTTTGAAAAATGGAAAAATTGTTGCAGTGAAGAAATTGGTGTTGGGAAAATCCAGCAAAATGGAGGATGATTTTGAAAGTGAAGTCAAGCTAATAAGTAATGTTCATCATCGAAATCTCGTTAGACTTCTCGGTTGTTGCAGCAAAGGTCAAGAGAGAATCCTAGTTTATGAGTACATGGCAAATAGTAGTCTTGACAGATTCTTATTTGGAATGCACTTGGAGTTAGTGGAGAAAGCCATAGGCCCTGATGAGTATGATGCAGAAGAAGTGATGAAAATCATAGAAATTGGTTTGCTGTGCACTCAACCATCAGCTGCATCAAGGCCAACAATGTGTGAAGTAGTGTCACTACTGAAAAGCAAGAGCTTACTAGAGCACCTGCGACCAACTATGCCTGTGTTTGTTGAATCTAATTTGAAGTCTCGCGAAGACAACTCTAGATCCACCTCAACTACTGGTTCTTCATCCAAGGCTACTGCCTCCATTTCTGTTCTATCAGCCAGATGA 1506 0.4276 MQVGYNNLHTCLPNTEGSAYDAGCFMKYSTTPFFSDNQIIDITPYLDQVGSPQTHEVNKGCSTYKQETNLPNFLANINDTFSSLRAQISNETNKHFAKAYKASGEVLAYAMFQCRNYLSKNNCLACFDTASTQIRTCSTSNGARIIYDGCFLRYESRRFDYETNTEGGGASCGNTTVKVDAGFRAAREKVLLELQTATPTMEGFYAATKTRVDGDSAIYAVAQCVESAAESDCLKCMQIGYNSLQNCINSTEGRAFDAGCFMRYSTLPFFSDNQTTAITPPTPYLKQGGSRRKKWAIICGVVGGVGILIVMLLALVTWQRYKKPKSLPREQGTLKNGKIVAVKKLVLGKSSKMEDDFESEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDRFLFGMHLELVEKAIGPDEYDAEEVMKIIEIGLLCTQPSAASRPTMCEVVSLLKSKSLLEHLRPTMPVFVESNLKSREDNSRSTSTTGSSSKATASISVLSAR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2099 501 Pfam Protein tyrosine and serine/threonine kinase 336 401 IPR001245 GO:0004672|GO:0006468
Aed4g2099 501 SMART tyrkin_6 331 451 IPR020635 GO:0004713|GO:0006468
Aed4g2099 501 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 49 329 - -
Aed4g2099 501 MobiDBLite consensus disorder prediction 471 501 - -
Aed4g2099 501 Gene3D Phosphorylase Kinase; domain 1 330 393 - -
Aed4g2099 501 SUPERFAMILY Protein kinase-like (PK-like) 334 405 IPR011009 -
Aed4g2099 501 MobiDBLite consensus disorder prediction 477 501 - -
Aed4g2099 501 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 43 - -
Aed4g2099 501 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 333 405 - -
Aed4g2099 501 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 49 329 - -
Aed4g2099 501 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 414 492 - -
Aed4g2099 501 Pfam Salt stress response/antifungal 61 156 IPR002902 -
Aed4g2099 501 Pfam Salt stress response/antifungal 176 266 IPR002902 -
Aed4g2099 501 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 1 43 - -
Aed4g2099 501 Gene3D - 54 159 IPR038408 -
Aed4g2099 501 Gene3D - 169 269 IPR038408 -
Aed4g2099 501 ProSiteProfiles Gnk2-homologous domain profile. 165 269 IPR002902 -
Aed4g2099 501 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 414 492 - -
Aed4g2099 501 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 333 405 - -
Aed4g2099 501 ProSiteProfiles Gnk2-homologous domain profile. 55 159 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2099 Aed-Chr4 24037789 24041974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2099 44 402 Receptor kinase-like Gene Family AT5G40380 29.540 6.26e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed4g2099 Stress-antifung 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2099 - - vun:114187094 551.206