Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2094 ATGGTGCAACTCAAGCTCGTAGCTTTAACCTTGTTGGTGTTGTGGTCATGGTGGAGTTTTGAGGGTGCAGTAGTAGTAGGAGACCCTCAACTCTTTTTACTCAAATGGGAGTGCAGCGCAGTCACTGTACGCGATTTGTCCAACTTCTACCAAAATCTAAACGCAAGTTTGGCAGACCTGAGAGTGCAGGTGAGTAACCAAAGAAAGCAATTTGTCACGGCTCAATCAACCACCGGAACGGATCCTGTCTATGCCATGTTCCAATGCAGAAACTACCTCTCCAACACTGACTGCGCCGCCTGTCTTGCCGCTGCCGCCGCCCGAATCCGCAACTGTTCCACCGGAAATACTGCCCGTGTCGTTTATGATGGCTGCATCCTCAGGTACGAGAACAATGAGTTCTTCGACAAGAATCTCGTTTCTAGCAGCCACTCAATCTGTGGAAATCAGACTGCAGATGAAAGCACTGGTTTTGGTGAAGTTGGACAGCAAGTGCTGATAGATCTACAAATAGCAACACCCAAAATTAGTGGCTACTTTGCAGCTACAAAAACAAAAGTGGCTGGAGGTGCAATCTACGCCATTGCGCAATGTGCTGAAACTCTAACACAAGATACTTGTTTGAATTGTTTGTCAATTGAGCAACTCGGAGTACAAGGTTGTCTTCCCAATACAAATGCTAGGGTAGTTGATCCTCCAGGGTGCTTTATGAGATACTCGGAGACACCCTTCTTTGCTGATAACCAAACAATTGATATCAGTCCCTTCTTAAAACAAGGAGGAAGAGGCTCAATCATGAAGTGGGTTGTTATTGGTGGCAGTGTTGCAGGTGCACTCCTTGCTGTGATCCTTATTTCATTATTTTCCCAGCAAAAAAGATTCCAAAGTCCCAAGAGAGTTCCTAGAATAGTAGGAGACCCTCAGCTCTTTCTACTGAAATGGGAGTGCAGCGTAGTCACTGTAAGCGACTTGTCCAACTTCTACCAAAATCTAAACGAAAGTTTTGCAGATCTGAGAGCGCAGGTGAGTAACCAAAGAAAGCACTTTGCCACGGCTCAATCAACCACCGGAACAGACCCTGTCTATGCCATGTTCCAATGCAGGAACTACCTCTTCAACACTGATTGCACCACCTGCTTCACTGTCTCCGCCGCCAATATCCGCAACTGCTCCACCGGAAACGGTGCCCACGTCGTTTATGATGGCTGCATCCTCAGGTATGAGAACAATGAGTTCCTGGACCAGAATATCATTACTATCAGCCACACACTTTGTGGAAATCAGACTGCAGATGAAAGCACTGCTTTTGGTGAAGTTGGACAACAAGTGCTGATGGATCTAAAAGTAGCAACACCCAGAATTAGTGGCTACTTTGCAGCTACCAAGACACAATTAGTGGCTGGCGGTGCAATCTATGCCATTGCACAATGTGCTGAAACTCTCACACAAGACACTTGTTTGGATTGCTTGTCAATTGAACAGAGTGGCTTACAAGATTGTCTTCCCAGTACAAATGGTAGGGGAGTCAATCCTCCTGTGTGCTTTATGAGATACTCAGAGACACCCTTCTTTGCTAATAACCAAACCATTGATATTAGTCCCTTCTTAAAACAAGGAAAAGGAGGTTCAAAGAAGAAGTGGGTCGTTATTGGTGGTGGTGTTGCAGGTGCACTCCTTGTTGTGATCCTTATTTCATTATTTTTGTGGCATAGAAGGTCCAAAAGTCCCAAGAGAGTTCCTAGAATTGCAGCCACACGTCTAATAAACACCGGGTGCAGCCCATTCAACGCTTCCAACCCGCGTAGCTTCTTTGGGAATGTCAATGATTCGTTTTCAGAGCTGAGTCAAGAAATTAGGAACCAAAGCATACACTTTGGCACAGTTAAAAAATCCAGGGGAGAGGTCAATACATATACTATGTTTCAATGCAGAAACTATCTCTCCAAAAATGACTGTCTTGCGTGCTTCAACAACGCCTCCATCCAAATCCGCGATATATGCTTAAAAGCCAACGGCGCCAGAGTCATCTACAATGACTGCTTCCTCAGGTATGAGAGCGAGAGGTTCTACCAACAGACCAATGAACTTGGCGGTGGAGTAACATGTGGGAACTTCAGTTCAAATGCCACGAATTTTAAAGCAGTTGGACTACAAGCACTACAAGACCTTCAAAAAGCAACACCAAAAACTAAAGGTTTTTATGCAGCTACTAGGACACAGCTGAATGGTGGAAGTAGTGCAATTTATGCGGTTGCACAGTGTGTTGAAACTGCCACAAAGGCTAAATGTCTGGATTGCATGACTGTTGGATTCAACAACTTACAAAGTTGCCTTCCCAACACAGACGGTACAGCATATGATGCTGGCTGTTTTATGAGATACTCCATGACACCCTTGTTTGCTCATAATCAAACCATTGATATAAGACCCTATCTCAAAGAAGGAGATTCAAGCAAGAAGTGGGGTATTATAGGTGGTGTTGTTGGAGGTGTTGTTCTCCTCCTTCTATTGTTTGCACTGCAATGGTCAAGGAAAACAAAGAAGGTTCACAGGGGTAAGCGATTTGTTATTCAACATCTGGGATACACAGCACCTGAATATGCAATGCAAGGTCAATTATCAGAGAAGGCTGATACATACAGCTATGGTATTGTTGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTAAAGATTGATGAGGAGGGTCGTGAGTACCTTCTTCAACGAGCATGGAAACTGTATGAGAGAGGCCAGCAGTTGGAGCTTGTGGACAAGGACATAGACCCTAGTGAATATGATGCAGAAGAAATGAAGAAAATCATAGAAATTGCATTGTTATGCACTCAAGCATCAGCTGCAACAAGACCAACGATGTCTGAATTAATAGTGCTACTCAAAAGCAAGAGCTTAGTGGAACACTTACGACCAACTATGCCTGTGTTTGTTGAAACGAATATGATGAATCGGGAAGGCATGTCTGCTGGTTCATCTAATGCTACTGTCTCCATTTCTGTTCTATCGGCACGATGA 3036 0.4433 MVQLKLVALTLLVLWSWWSFEGAVVVGDPQLFLLKWECSAVTVRDLSNFYQNLNASLADLRVQVSNQRKQFVTAQSTTGTDPVYAMFQCRNYLSNTDCAACLAAAAARIRNCSTGNTARVVYDGCILRYENNEFFDKNLVSSSHSICGNQTADESTGFGEVGQQVLIDLQIATPKISGYFAATKTKVAGGAIYAIAQCAETLTQDTCLNCLSIEQLGVQGCLPNTNARVVDPPGCFMRYSETPFFADNQTIDISPFLKQGGRGSIMKWVVIGGSVAGALLAVILISLFSQQKRFQSPKRVPRIVGDPQLFLLKWECSVVTVSDLSNFYQNLNESFADLRAQVSNQRKHFATAQSTTGTDPVYAMFQCRNYLFNTDCTTCFTVSAANIRNCSTGNGAHVVYDGCILRYENNEFLDQNIITISHTLCGNQTADESTAFGEVGQQVLMDLKVATPRISGYFAATKTQLVAGGAIYAIAQCAETLTQDTCLDCLSIEQSGLQDCLPSTNGRGVNPPVCFMRYSETPFFANNQTIDISPFLKQGKGGSKKKWVVIGGGVAGALLVVILISLFLWHRRSKSPKRVPRIAATRLINTGCSPFNASNPRSFFGNVNDSFSELSQEIRNQSIHFGTVKKSRGEVNTYTMFQCRNYLSKNDCLACFNNASIQIRDICLKANGARVIYNDCFLRYESERFYQQTNELGGGVTCGNFSSNATNFKAVGLQALQDLQKATPKTKGFYAATRTQLNGGSSAIYAVAQCVETATKAKCLDCMTVGFNNLQSCLPNTDGTAYDAGCFMRYSMTPLFAHNQTIDIRPYLKEGDSSKKWGIIGGVVGGVVLLLLLFALQWSRKTKKVHRGKRFVIQHLGYTAPEYAMQGQLSEKADTYSYGIVVLEIISGQKSTDVKIDEEGREYLLQRAWKLYERGQQLELVDKDIDPSEYDAEEMKKIIEIALLCTQASAATRPTMSELIVLLKSKSLVEHLRPTMPVFVETNMMNREGMSAGSSNATVSISVLSAR 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 418 523 IPR002902 -
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 585 689 IPR002902 -
Aed4g2094 1011 Gene3D - 310 412 IPR038408 -
Aed4g2094 1011 Gene3D - 583 689 IPR038408 -
Aed4g2094 1011 Gene3D - 417 523 IPR038408 -
Aed4g2094 1011 Gene3D - 700 798 IPR038408 -
Aed4g2094 1011 Gene3D - 32 134 IPR038408 -
Aed4g2094 1011 Gene3D - 140 244 IPR038408 -
Aed4g2094 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 302 - -
Aed4g2094 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 304 581 - -
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Aed4g2094 1011 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 584 852 - -
Aed4g2094 1011 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 858 1005 - -
Aed4g2094 1011 Pfam Salt stress response/antifungal 428 520 IPR002902 -
Aed4g2094 1011 Pfam Salt stress response/antifungal 596 686 IPR002902 -
Aed4g2094 1011 Pfam Salt stress response/antifungal 320 409 IPR002902 -
Aed4g2094 1011 Pfam Salt stress response/antifungal 42 131 IPR002902 -
Aed4g2094 1011 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Aed4g2094 1011 Pfam Salt stress response/antifungal 703 795 IPR002902 -
Aed4g2094 1011 Pfam Protein tyrosine and serine/threonine kinase 859 965 IPR001245 GO:0004672|GO:0006468
Aed4g2094 1011 Gene3D Transferase(Phosphotransferase) domain 1 836 985 - -
Aed4g2094 1011 SUPERFAMILY Protein kinase-like (PK-like) 856 983 IPR011009 -
Aed4g2094 1011 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 302 - -
Aed4g2094 1011 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 304 581 - -
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 309 412 IPR002902 -
Aed4g2094 1011 Coils Coil 50 70 - -
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 140 244 IPR002902 -
Aed4g2094 1011 Coils Coil 328 348 - -
Aed4g2094 1011 ProSiteProfiles Gnk2-homologous domain profile. 693 799 IPR002902 -
Aed4g2094 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 584 852 - -
Aed4g2094 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 858 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2094 Aed-Chr4 24006431 24021249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2094 838 973 Receptor kinase-like Gene Family AT1G56120 47.059 2.07e-31 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed4g2094 PK_Tyr_Ser-Thr 5.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2094 - - vun:114187094 518.464