Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2084 ATGAATTCGGATATTTCGAGAGAGCAGCAGGTATGGGACGGCGGAGCCACGGCGGAGAACATGAGCATGAGCCTCCAAGATTTGTTGTTGACTCCTCAATCTCAATCTCATCAAGGAAATGGAAAGAGAAAGGCCATGGAGGAGGAACCCCAACCCCTCGATAATAAGACCACTCTTCAGAAGCAGAGAAGGATGATCAAAAACAGAGAATCTGCCGCTAGGTCAAGGGAACGAAAGCAGGCTTACACAGTCGAGCTTGAGTCTTTGATTACACTTCTCGAACAAGAGAATGCTCAATTGTTGAAGGAAGAGGCGGATAGGAAAAGGCAGAGGTTCAATCAGCTCATGGAGTGCCTTATTCCAGTTGAGGACAAGCGTAAACCAAGACCAATGCTTCGGAGAGTGAATTCATCCCAATGGTGA 423 0.4728 MNSDISREQQVWDGGATAENMSMSLQDLLLTPQSQSHQGNGKRKAMEEEPQPLDNKTTLQKQRRMIKNRESAARSRERKQAYTVELESLITLLEQENAQLLKEEADRKRQRFNQLMECLIPVEDKRKPRPMLRRVNSSQW 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2084 140 Coils Coil 79 110 - -
Aed4g2084 140 MobiDBLite consensus disorder prediction 1 40 - -
Aed4g2084 140 SMART brlzneu 56 120 IPR004827 GO:0003700|GO:0006355
Aed4g2084 140 MobiDBLite consensus disorder prediction 1 80 - -
Aed4g2084 140 PANTHER OS05G0437700 PROTEIN 27 139 - -
Aed4g2084 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 58 110 IPR004827 GO:0003700|GO:0006355
Aed4g2084 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 63 78 IPR004827 GO:0003700|GO:0006355
Aed4g2084 140 Pfam bZIP transcription factor 58 103 IPR004827 GO:0003700|GO:0006355
Aed4g2084 140 SUPERFAMILY Leucine zipper domain 60 110 IPR046347 GO:0003700|GO:0006355
Aed4g2084 140 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 139 IPR043452 GO:0003700|GO:0045893
Aed4g2084 140 CDD bZIP_plant_BZIP46 60 102 - -
Aed4g2084 140 MobiDBLite consensus disorder prediction 60 80 - -
Aed4g2084 140 Gene3D - 59 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2084 Aed-Chr4 23965713 23967289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2084 37 140 bZIP Transcription Factor Family AT5G44080 52.830 3.01e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g2084 bZIP_1 2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2084 K14432 - gmx:100101878 196.438