Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2077 ATGGATATGTTGAATGTAGTGCAGGCGTTAAAGCCAGTTCTGCTAATGGTGTTGGTGCAGTTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTTGCGCTTAACGATGGCATGAACTTGAGTGTCATTGTTGCTTACCGCTATATTTTTGCAACTGCTTTCATTGCTCCACTTGCTCTCATTCTTGAAAGGAAGACGAGGACAAAGATGACTTGGACGATACTGTTTCAGTCATTTCTGTGCGGCTTAATTGGGGGAGCATTGCCTCAAAACTTAAACATGGAAGCGATTGCTTTAACTTCTGTAACGTTTACAACAGCCATATCCAACCTCATTCCAGCAATCACCTTTATCATATCTCTCTCCTTCGGATTGGAGAGATTAAATATAAGAACAAGAGGAGGGAAGGCGAAGCTAATTGGAACGATAACTGGAATAAGTGGGGCAATGATGCTCACATTCATTAAAGGCCCAGAAGTTAAGATGTTGTCTTTCCATGCAAACCTTTTCAACAACCGACACGACGCTCATGTCGTACATCACCACGCTGCTACTTCAGGCCTTATGACCATATTTGGTGCTCTCGCCTCTGTCGCAAGCAACGTCTCTTATGCTCTCTGGCTTATCATTCAGGCAAAGATGAGTGAAAGATACCCGTGTCCTTATTCAAGCACAGCGTTAATGTCCCTAATGGGGGCACTGTTATCCATTTCATTTGCTTTTTCCGTTGAAAGGGATTTCAGTCAGTGGAGATTGGGTTGGAATGTTAGACTATTCACTGTGGCTTATGCGGGTATAGTGGTTTCTGGAATAATGGTAGCGGTGATTTCGTGGTGTGTACGCACGAGAGGTCCACTGTTTGTCTCCGTTTTTAGCCCTCTAATGCTTGTAGTTGTGGCCATTGCTGGATCCACTATTTTGGACGAGAACCTGTACCTTGGAAGCATCATTGGATCAATGTTTATTATTTTGGGATTATACGTTGTTCTTTGGGGTAAGAGCAAAGAGATCAAGATGAACAATCCCCATGAATCTGTTCCATCTAACGCTACAGTGGACATAATAATGGTGAAACCTGGTGCAGAAGATAAGGACAATACAATACTCGTAAATGTGGATGGGTGTAATAAACTAGAGTACTCATGGGAAAATGGACGTGAAAACATTGTAAGTACCCCACAAATAAAACACTATTGCAAGGCGAGAGAAGAAGAATAG 1218 0.4261 MDMLNVVQALKPVLLMVLVQFANAWVNVLYKLALNDGMNLSVIVAYRYIFATAFIAPLALILERKTRTKMTWTILFQSFLCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPAITFIISLSFGLERLNIRTRGGKAKLIGTITGISGAMMLTFIKGPEVKMLSFHANLFNNRHDAHVVHHHAATSGLMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSISFAFSVERDFSQWRLGWNVRLFTVAYAGIVVSGIMVAVISWCVRTRGPLFVSVFSPLMLVVVAIAGSTILDENLYLGSIIGSMFIILGLYVVLWGKSKEIKMNNPHESVPSNATVDIIMVKPGAEDKDNTILVNVDGCNKLEYSWENGRENIVSTPQIKHYCKAREEE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2077 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 335 - -
Aed4g2077 405 Pfam EamA-like transporter family 11 153 IPR000620 GO:0016020|GO:0016021
Aed4g2077 405 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Aed4g2077 405 PANTHER WAT1-RELATED PROTEIN 11 352 - -
Aed4g2077 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 153 - -
Aed4g2077 405 PANTHER WAT1-RELATED PROTEIN 11 352 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2077 Aed-Chr4 23916068 23920627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2077 8 338 Nodulin-like Gene Family AT1G68170 44.411 3.24e-95 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2077 - - gmx:100788378 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g2077 4 23916068 23920627 Aed10g2141 10 24949356 24952028 PCT