Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2076 ATGAAGGATGTGTGCAATGTGGTGCAGGGTTTGAAGCCTGTGCTACTAATGGTATTGGTGCAGATAGCATTTGCAGGGGTTAATATCTTCTACAAGCTTGCCGTAAACGATGGCATGAGCTTGAAGGTCATTGTTGCCTACCGTTTTGTATTTGCCACAATTTTCATAGCTCCACCTGCTCTCATTCTTGAAAGGAAGAAGAGGACAAAGATGACTTGGATGATACTGTTTCAATCTTTTCTTTGCGGCTTATTTGGGGGATCATTAGCTCAAAATTTCTACTTACAAGCCCTGGCTTTAACTTCTGCAACGTTTGCATCTGCAATGGCGAATCTTATACCAGGCATAACCTTTATCTTGGCCGTTTGTTTCGGTTTGGAACGATTAAATTTGAGAACAACAGCAGGGAAGGCGAAAATAGTAGGTACATTAATTGGAATTGGTGGGGCAATGGTACTTACTTTCGTTAAAGGTGCGGATATCGAATTGGGGTCCTTTCACGTTAACCTTTTGCATCACCGAAAGGGTACTACTCACGCACACGCTACTAATACCCTCTTGGGTTCTCTCTGCGCTCTGGCTAGTGCCATCAGCTATGCATTGTGGCTCATCATTCAGGCGAAGATGAGTGAACGATACCCTAGTCCTTACTCAAGCACGGCCTTCATGTCATTTTGGGGATCACTACAATCCATCTTGTTTGCACTTTGTGTTGAGAGGGACTGGACTCAGTGGAGATTGGGTTGGAATATTAGGCTACTCACTGCAGCTTATTCGGGTATTGTGGTTTCTGGAGTGATGGTGGTTGTGATTGCATCGTGTGTCCACATAAGAGGCCCATTGTTTGTCTCTGCTTTTAGCCCACTCATGCTCGTCATAGTGGCCTTGGCCGGTTCTATCATGTTGAACGAGCAGCTACACCTGGGAGGTATTATTGGAGCAGTGATGATTGTGTGTGGCTTATATATGGTATTATGGGGTAAAAGTAAAGAGATGAAGAAGAATCAATTAGTGTCAGCACAAATCCCCCAGGACTCTAACACGGTTGAAATAGTCGTGAGCAGTTCAGTAGACGTAGAAGATAACGACAATTCAAATTGTTCACATGAACACCATCAGGAGGGAAACATAGGAGTACATAATACTTCACATGCCTAA 1158 0.4387 MKDVCNVVQGLKPVLLMVLVQIAFAGVNIFYKLAVNDGMSLKVIVAYRFVFATIFIAPPALILERKKRTKMTWMILFQSFLCGLFGGSLAQNFYLQALALTSATFASAMANLIPGITFILAVCFGLERLNLRTTAGKAKIVGTLIGIGGAMVLTFVKGADIELGSFHVNLLHHRKGTTHAHATNTLLGSLCALASAISYALWLIIQAKMSERYPSPYSSTAFMSFWGSLQSILFALCVERDWTQWRLGWNIRLLTAAYSGIVVSGVMVVVIASCVHIRGPLFVSAFSPLMLVIVALAGSIMLNEQLHLGGIIGAVMIVCGLYMVLWGKSKEMKKNQLVSAQIPQDSNTVEIVVSSSVDVEDNDNSNCSHEHHQEGNIGVHNTSHA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2076 385 PANTHER WAT1-RELATED PROTEIN 12 360 - -
Aed4g2076 385 MobiDBLite consensus disorder prediction 359 385 - -
Aed4g2076 385 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020|GO:0016021
Aed4g2076 385 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020|GO:0016021
Aed4g2076 385 PANTHER WAT1-RELATED PROTEIN 12 360 IPR030184 GO:0016021|GO:0022857
Aed4g2076 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Aed4g2076 385 MobiDBLite consensus disorder prediction 363 377 - -
Aed4g2076 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 241 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2076 Aed-Chr4 23908884 23911058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2076 11 351 Nodulin-like Gene Family AT1G25270 47.384 4.81e-103 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2076 - - gmx:100810649 575.859