Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2057 ATGAGTCAACGTGTGAGTAACGAGGTTGGGGAGATAGGAAGCGGGGCTTCTTCACGTAGGCATGGGCATGGAGATAATAGTTTGCCATATATTCACAAGGTGGGAACTCCTCCTAAGCAGACACTATTCCAAGAGATCAAGCACTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTGGAACAATTTAAGGACCAAACCGGTTCTAGAAAGTTTCTTTTAGGCTTCCAATCTCTCTTCCCCATCTTTCAATGGGGAAGGGATTACAATCTTAAAAAATTTAGAGGTGACTTCATTTCTGGACTAACCATTGCAAGTCTCTGCATCCCTCAGGACATTGCATACGCAAAGCTTGCGAATTTGGATCCCCAGTATGCACTATACACAAGTTTTGTGTGTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATAGGACCCGTAGCTGTGGTGTCCCTCTTGCTTGGGACTCTGCTAACCGATGAGATCAGTGACTTCAAAACTCATGAATACCTGCGTCTTGCATTTACCGCTACCTTCTTTGCAGGGGTCACTCAAATGGCACTTGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCTATTGTCGGATTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATCAAAACATTCACCAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTTCAATGCAGCACACCATGGGGTACGTAAGTGGAATTGGGAGACAATACTCATTGGAGTATCATTCTTGGTTTTCCTTCTTATAACCAAGTATATTGCTAAAAAGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCTATGATCTCTGTTATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGCGTGGCAATTGTGAGACATGTCAAGCAGGGTGTAAATCCATCATCTGCCAGTGATATTTTTTTCAATGGAAAATATCTAGGCCCTGGTATTCGGATTGGTATAGTAGCTGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATTCACTGGATGGTAACAAAGAAATGATGGCAATGGGAGCAATGAACATTATTGGTTCACTAACATCTTGTTATGTGGCTACAGGATCTTTTTCTCGGTCAGCAGTGAATTACATGGCTGGTTGTAAAACTGCAGTATCAAACATAGTTATGTCCATCGTTGTGTTATTAACACTGCTACTCATAACGCCACTCTTTAAGTACACTCCAAATGCGGTGCTTGCATCTATTATAATAGCTGCCGTGCTTGGCCTTGTGAACATTGAAGCAATTATTCTGCTGTGGAAGATTGACAAATTCGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGTGTCATCTTCATAAGTGTTGAGATTGGCCTTCTGATTGCGGTGGCTATATCTTTTGCCAAAATCCTTTTACAAGTGACAAGGCCAAGAACTGTAGTACTAGGGAAACTTCCAGGGACTAGTGTTTACAGGAACATCCAGCAATACCCCAGTGCAACCCAAATTAATGGCATGCTGATTATAAGGGTTGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAAGAGAGAATTTTGAGATGGTTGGCTGATGAAGAAGCCCAAAGGACGAATGGATTGTCAAGAATAGAGCATGTCACTGTTGAAATGTCACCTGTTACTGATATTGACACTAGTGGTATCCATGCATTTGAAGAGTTACACAAGGCCCTTCAGAAAAGAAAAGTACAGCTAATCTTGGCAAACCCCGGGCCAATTGTAATGGAGAAGCTCCACGCATCCAAGTTAGCAGACTTAATTGGGGAAGATAAAATATTTCTAACAGTGGCTGATGCAGTTTCAACTTTTGGTCCAAAGGGTGAAGCAGCACTATGA 1950 0.4226 MSQRVSNEVGEIGSGASSRRHGHGDNSLPYIHKVGTPPKQTLFQEIKHSVVETFFPDKPLEQFKDQTGSRKFLLGFQSLFPIFQWGRDYNLKKFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVCPLVYAFMGSSRDIAIGPVAVVSLLLGTLLTDEISDFKTHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKTFTKKTDIVSVMRSVFNAAHHGVRKWNWETILIGVSFLVFLLITKYIAKKNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVRHVKQGVNPSSASDIFFNGKYLGPGIRIGIVAAIGRTFAAMKDYSLDGNKEMMAMGAMNIIGSLTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACMGAFFGVIFISVEIGLLIAVAISFAKILLQVTRPRTVVLGKLPGTSVYRNIQQYPSATQINGMLIIRVDSAIYFSNSNYIKERILRWLADEEAQRTNGLSRIEHVTVEMSPVTDIDTSGIHAFEELHKALQKRKVQLILANPGPIVMEKLHASKLADLIGEDKIFLTVADAVSTFGPKGEAAL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2057 649 ProSiteProfiles STAS domain profile. 519 641 IPR002645 -
Aed4g2057 649 Gene3D STAS domain 499 642 IPR036513 -
Aed4g2057 649 PANTHER SULFATE TRANSPORTER 14 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed4g2057 649 SUPERFAMILY SpoIIaa-like 521 642 IPR036513 -
Aed4g2057 649 Pfam Sulfate permease family 94 467 IPR011547 GO:0016021
Aed4g2057 649 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 14 646 - -
Aed4g2057 649 Pfam STAS domain 520 637 IPR002645 -
Aed4g2057 649 CDD STAS_SulP_like_sulfate_transporter 520 634 - -
Aed4g2057 649 MobiDBLite consensus disorder prediction 1 28 - -
Aed4g2057 649 TIGRFAM sulP: sulfate permease 81 637 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2057 Aed-Chr4 23779580 23783195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2057 1 644 Inorganic Solute Cotransporters AT1G22150 69.924 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2057 K17470 - gmx:100784124 1132.86