Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2053 ATGGCAGCTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACCCTTCTAGCCACTGCTATTGGGGGTGTTGCTGTTACTCCTAAAAGACTCGTTGTGGTAGCTGCTGCTGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGTGTCAAAGCTGGTGGCAATCTAGTCGACCCAGAATGGCTTGATGGATCGCTACCAGGTGACTTTGGTTTTGACCCACTAGGGCTTGGGAAGGACCCAGCATTCCTGAAATGGTACAGAGAGGCTGAGCTTATTCATGGGAGATGGGCAATGACTGCAGTATTAGGAATATTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCAAATGCTATTGCTCCTTTCTCCTTTGGTACTCTTCTGGGAACCCAGTTGCTCCTCATGGGGTGGGTTGAGAGCAAGAGATGGGTTGATTTCTTCAACCCTGACTCTCAGTCTGTTGAATGGGCCACTCCATGGTCTAAAACTGCTGAGAACTTTATCAATTCCACTGGTGAGCAAGGCTACCCAGGAGGCAAATTCTTTGACCCTTTGAGCTTTGCTGGCACCATCAAGGATGGAGTTTACATTCCTGATACTGACAAGCTCGAAAGATTGAAACTCGCTGAGATTAAGCATGCAAGGATTGCTATGTTAGCCATGCTCATTTTCTACTTTGAGGCTGGACAAGGGAAGACCCCCCTTGGTGCTCTTGGCTTGTAA 774 0.4935 MAAATSGAVLNGLGSSFLSGGNRSQTLLATAIGGVAVTPKRLVVVAAAAAAPKKSWLPGVKAGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMTAVLGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTAENFINSTGEQGYPGGKFFDPLSFAGTIKDGVYIPDTDKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2053 257 Gene3D Chlorophyll a/b binding protein domain 69 256 - -
Aed4g2053 257 Pfam Chlorophyll A-B binding protein 69 245 IPR022796 -
Aed4g2053 257 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 257 - -
Aed4g2053 257 SUPERFAMILY Chlorophyll a-b binding protein 65 257 - -
Aed4g2053 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 257 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2053 Aed-Chr4 23760861 23762620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2053 1 257 Chloroplast and Mitochondria Gene Families AT1G15820 81.395 2.73e-153 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2053 K08917 - gmx:100527463 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2114 10 24794530 24796428 Aed4g2053 4 23760861 23762620 PCT