Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2050 ATGAATCAGGGTGGTTTGTGGAGCAAACAGTTGGTTGTTATAATAAAGTTTGTTTTGGTGGTTGTGAACACAGTGACAGTGCATGGGAATGGGAATGGGGAAGGGACGTGTGTAGGGTTCTATTCTCGTAGATGTCCACGTGCTGAGTCGATAGTGACGTCCACAGTTGAAACCCATCTTAGGTCAGATCCAAGTTTGGCTGGTCCAATACTTAGGATGCACTTCCATGACTGCTTTAGTGGTGGACTAAGTTGGCAAGTGCCGACTGGACGCAAAGATGGAAGGGTTTCAATTGGATCAGAAGCCTTTACTTTGCCTGGTCCTAACGATTCAGTGGCAATCCTGAATGACAAGTTTTTAAAAAAGGGTCTTAACACCGAAGACCTCGTGCTTCTCTCTGGTGGGCATACGATAGGTACAAGTGCTTGCCAATTTTTCGCAGACAGAATATACAACTCGATTAATGGCACTGATCCTTCGATCGACCCTTCGTTTCTTCCATTTCTGCGACAAATATGTCCACAGAACGAACCAAGGAAGCGAGTGGCACTAGACACAGGAAGCCAATTCAAATTCGACACATCATACTTCGCTCACCTAACCAGAGGCCGCGGAATTCTCCGTTCAGATCAGGTGCTTTGGACCGATGCTTCCACCAGACGCTTTGTTCAGAAATACTTGGCCGCGGGTCCTTTCAACGTCCAATTCGGCAAGTCTATGATCAAGATGAGCAACATTGGTGTCAAGACCGGTTCTCAGGGTGAAATTCGCAACAAATGTTCCGCTATTAATTAA 795 0.4616 MNQGGLWSKQLVVIIKFVLVVVNTVTVHGNGNGEGTCVGFYSRRCPRAESIVTSTVETHLRSDPSLAGPILRMHFHDCFSGGLSWQVPTGRKDGRVSIGSEAFTLPGPNDSVAILNDKFLKKGLNTEDLVLLSGGHTIGTSACQFFADRIYNSINGTDPSIDPSFLPFLRQICPQNEPRKRVALDTGSQFKFDTSYFAHLTRGRGILRSDQVLWTDASTRRFVQKYLAAGPFNVQFGKSMIKMSNIGVKTGSQGEIRNKCSAIN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2050 264 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 ProSiteProfiles Plant heme peroxidase family profile. 79 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 Gene3D - 37 81 - -
Aed4g2050 264 Pfam Peroxidase 81 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PANTHER PEROXIDASE 80 262 - -
Aed4g2050 264 Gene3D Peroxidase, domain 2 106 243 - -
Aed4g2050 264 ProSiteProfiles Plant heme peroxidase family profile. 35 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PANTHER PEROXIDASE 25-RELATED 17 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PANTHER PEROXIDASE 25-RELATED 80 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 CDD secretory_peroxidase 38 263 IPR033905 GO:0004601|GO:0042744
Aed4g2050 264 PANTHER PEROXIDASE 17 82 - -
Aed4g2050 264 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Aed4g2050 264 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 SUPERFAMILY Heme-dependent peroxidases 38 264 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed4g2050 264 Gene3D - 82 264 - -
Aed4g2050 264 ProSitePatterns Peroxidases proximal heme-ligand signature. 128 138 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2050 Aed-Chr4 23747916 23749362 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2050 9 264 Peroxidase AT5G64120 41.104 4.36e-71 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2050 K00430 - gmx:100789249 363.229