Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2049 ATGAATATTTCAATTATTCTGATTGTGGTTCTTCTGCTTGCAATAATATTGCTTTTGCTGCTTTACTACAACACAGCCAGAAAGCTGAATAAAATAGTGAAGCTAGGGCAGATTCCTACAGTCAAAGAAGAGAAAGAGAGCGATGATGTGGAGATGAGTGTTGACAAGAAGATAGAGATAGGAGAGGGGACAAGAATGGTGACAGTGGAAGAGAGAAAGGAACTGGTATTCTTTGATGATAAGCAAAAGTTTCAAATGGGTGAACTTCTGAGAGCTTCTGCTGAGGCACTGGGTCACGGGATATTGGGAAATATTGCGAGAGAAGTGGGTCGAGCATTGGTGTACCTGCACCTCAACAGCAAGTTCCACAACGTTGTCCCACATGGAAACTTGCGGTCTTCAAACGTGCTATTCGATGAAAACGATGTGGTTCTTGTTTCCGACTTCGGTCTTGGGTCCTTGATAGCACAACCAATTGCGGCTCAGCACATGGTTGTATACAAATGCCCTGAATATGGGTACGCAAGAAGGGTGACAATGCAATCTGATGTTTGGAGCTATGGATCGCTTCTCATAGAGCTTCTAACTGGGAAAGTTTCTGTGTGCTCGGCTCCACCGGGGACCAATGGGGTGGACCTATGCAGCTGGGTTCACAGAGCTGTGAGAGAGGAATGGACTGCTGAGATCTTTGACAACGAAATTTCTGGCCAGAAAAGTGCGCTTCCTGGGATGCTGAGGTTGCTGCAGATTGCAATGCGTTGCATTGAGAGGTTCCCTGAGAAACGTCCTCAGATGAGAGAGGTGTTGAGGGAAGTGGACAAAATACAGGGTCCCTCCTTCGTCTCTGAAGATGATGACGATGTATCTGGTGATAGGTCCCTTACTGATGAATATGATTCCCTTTCAACCACTACTTCCATTATGGGAGATGAAAAATAG 939 0.4558 MNISIILIVVLLLAIILLLLLYYNTARKLNKIVKLGQIPTVKEEKESDDVEMSVDKKIEIGEGTRMVTVEERKELVFFDDKQKFQMGELLRASAEALGHGILGNIAREVGRALVYLHLNSKFHNVVPHGNLRSSNVLFDENDVVLVSDFGLGSLIAQPIAAQHMVVYKCPEYGYARRVTMQSDVWSYGSLLIELLTGKVSVCSAPPGTNGVDLCSWVHRAVREEWTAEIFDNEISGQKSALPGMLRLLQIAMRCIERFPEKRPQMREVLREVDKIQGPSFVSEDDDDVSGDRSLTDEYDSLSTTTSIMGDEK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2049 312 PANTHER RECEPTOR-LIKE KINASE 3 104 - -
Aed4g2049 312 MobiDBLite consensus disorder prediction 295 312 - -
Aed4g2049 312 Pfam Protein tyrosine and serine/threonine kinase 84 271 IPR001245 GO:0004672|GO:0006468
Aed4g2049 312 SUPERFAMILY Protein kinase-like (PK-like) 96 275 IPR011009 -
Aed4g2049 312 Gene3D Transferase(Phosphotransferase) domain 1 85 292 - -
Aed4g2049 312 ProSiteProfiles Protein kinase domain profile. 1 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2049 312 SMART serkin_6 27 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g2049 312 PANTHER OS05G0588300 PROTEIN 3 104 - -
Aed4g2049 312 MobiDBLite consensus disorder prediction 276 312 - -
Aed4g2049 312 PANTHER RECEPTOR-LIKE KINASE 105 306 - -
Aed4g2049 312 PANTHER OS05G0588300 PROTEIN 105 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2049 Aed-Chr4 23744011 23745284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2049 105 298 Receptor kinase-like Gene Family AT4G31250 38.049 2.58e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed4g2049 PK_Tyr_Ser-Thr 3.2e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2049 - - gmx:100816006 358.607