Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2043 ATGTCTTCTTCTCTTTCAATTCCGATTCCAATTCCGATCGCAATGGATTGTGTGACGGTGACGCAGATGGCTTTTTTCAAACCTCTGAAACAGAAGCACCAGCGTCATTTGGTGAGTGTTAGACCACTTCATCGCCGTCTCAACTCCGTTACGCCTTTGCGGTGCTCTTCCGCCGGTGATGACGCCGTCATTACTCTCAGCGTTGGGGGAATGATGTGCGAGGGATGTGCAAACAGCGTCAAAAAAATTCTAGAAAGCCGACCACAAGTATTATCTGCTCATGTTAATTTGACATCGGAGACCGCAACTGTTTCCCCCTTGCCTGAACAAATAACTGCACCAAATGGCGGCTTGAAGCAATTGGGGGAGGAACTTGCACAGCATTTAACTACCTGTGGTTTCACTTCTACCCTTCGTGGTTAA 423 0.4775 MSSSLSIPIPIPIAMDCVTVTQMAFFKPLKQKHQRHLVSVRPLHRRLNSVTPLRCSSAGDDAVITLSVGGMMCEGCANSVKKILESRPQVLSAHVNLTSETATVSPLPEQITAPNGGLKQLGEELAQHLTTCGFTSTLRG 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2043 140 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 52 137 - -
Aed4g2043 140 CDD HMA 65 104 IPR006121 GO:0046872
Aed4g2043 140 PANTHER ATP7, ISOFORM B 52 137 - -
Aed4g2043 140 SUPERFAMILY HMA, heavy metal-associated domain 60 113 IPR036163 GO:0046872
Aed4g2043 140 ProSitePatterns Heavy-metal-associated domain. 68 97 IPR017969 GO:0046872
Aed4g2043 140 ProSiteProfiles Heavy-metal-associated domain profile. 63 138 IPR006121 GO:0046872
Aed4g2043 140 Pfam Heavy-metal-associated domain 65 112 IPR006121 GO:0046872
Aed4g2043 140 Gene3D - 60 139 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2043 63 139 Primary Pumps ATPases AT4G33520 63.636 3.13e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2043 K17686 - gmx:100527143 215.698