Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2041 ATGGATTGTTTCTGTTGCTTCAACAATCAGGCGGTTGGAGGACGCACTTCATGTGGCTCTGGCAAGGGCAAGAGCCACCAGGGCTCAGTTAAGTATGGCTTTAGCCTAGTTAAAGGGAAAGCAAACCACCCAATGGAGGACTATCATGTAGCAAAAATTGTCAAGTTTGGAGGGCAAGAGTTAGGACTTTTTGCTATATATGATGGACACTTGGGAGACAGTGTGCCTGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAATGAGGAGGACTTCTGGACTGATACAGCCAGTTCCATCATTAAAGCCTATGAGACAACAGATCAGGCCATTCTTTCTCACAGTTCTGATTTGGGGCGAGGAGGATCGACTGCAGTGACTGCAATTCTTATTAATAATCAGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTTTGTCAAGGAGAGGGGTGGCTGAACAGATGAGTGTTGACCATGAGCCCAATACTGAGAGGGGCATGATCGAGAACAAAGGCGGCTTTGTCTCAAACATGCCAGGAGACGTTGCAAGAGTAAATGGGCAGCTTGCAGTTTCTCGAGCATTTGGAGACAAAAATCTAAAATCACACTTGCGATCTGATCCTGATATTCGACATGTTGATATTGACCCAGATGCTGAGCTTTTGATACTTGCCAGTGATGGAAGGATAAAAGATCCACAAAAGGCAGCTAAACAACTAGTTGCTGAATCATTGAACAGAGAGAGTAAGGATGATATTTCGTGCATTGTAGTTCGTTTCAAGGGATGA 798 0.4386 MDCFCCFNNQAVGGRTSCGSGKGKSHQGSVKYGFSLVKGKANHPMEDYHVAKIVKFGGQELGLFAIYDGHLGDSVPAYLQKHLFSNILNEEDFWTDTASSIIKAYETTDQAILSHSSDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRRGVAEQMSVDHEPNTERGMIENKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKSHLRSDPDIRHVDIDPDAELLILASDGRIKDPQKAAKQLVAESLNRESKDDISCIVVRFKG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2041 265 SMART PP2C_4 27 261 IPR001932 -
Aed4g2041 265 Gene3D - 16 265 IPR036457 -
Aed4g2041 265 SUPERFAMILY PP2C-like 28 264 IPR036457 -
Aed4g2041 265 ProSiteProfiles PPM-type phosphatase domain profile. 31 263 IPR001932 -
Aed4g2041 265 PANTHER PROTEIN PHOSPHATASE 2C 5 264 IPR015655 GO:0004722|GO:0006470
Aed4g2041 265 CDD PP2Cc 30 263 IPR001932 -
Aed4g2041 265 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 5 264 - -
Aed4g2041 265 Pfam Protein phosphatase 2C 40 231 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2041 Aed-Chr4 23690547 23693967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2041 1 264 PP2C-type Phosphatase Gene Family AT1G22280 66.551 1.66e-130 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2041 K17506 - gmx:100787659 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2095 10 24674732 24681045 Aed4g2041 4 23690547 23693967 PCT