Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g2008 ATGGGAGTGGAGAAGCAGCTGTTGACGCCTGGCACCGGTCCCAAGCCAATTCCCGGTCAAAACGTTACCGTTCACTGCACTGGTTTCGCAGGGAAAAACGGTGACCTTTCTCAGAAATTCTGGAGCACAAAGGATTCTGGCCAGAGCCCTTTCACATTCAAAATCGGCCAAGGTTCTGTTATCAAAGGATGGGATGAAGGTGTGCTTGCCATGCAAGTTGGTGAAGTTGCTCGTCTCCGGTGCTCTCCGGATTATGCTTATGGTGCTGGTGGGTTTCCTGCTTGGGGAATACAGCCCAACTCTATCTTGGAATTTGAAATCGAAGTCTTGAGTGCGCAATGA 342 0.5029 MGVEKQLLTPGTGPKPIPGQNVTVHCTGFAGKNGDLSQKFWSTKDSGQSPFTFKIGQGSVIKGWDEGVLAMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSILEFEIEVLSAQ 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g2008 113 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g2008 113 Gene3D - 1 113 IPR046357 GO:0003755
Aed4g2008 113 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 113 IPR001179 GO:0003755
Aed4g2008 113 SUPERFAMILY FKBP-like 2 111 - -
Aed4g2008 113 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 110 IPR001179 GO:0003755
Aed4g2008 113 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 112 - -
Aed4g2008 113 PANTHER PEPTIDYLPROLYL ISOMERASE 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g2008 Aed-Chr4 23515999 23523116 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g2008 16 111 Calmodulin-binding Proteins AT5G48570 42.708 5.48e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g2008 K01802 - gmx:100305505 221.476