Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1997 ATGGATGGTCACGGTCATGGTCACGGAGGAGGAGGGAACAAAGGAGAAGCGGAGCGATGGCTTTACACAGCGAACAAGGTATTAAGCGCACGTGACCTGCACGGGGCCCGGTCATTTGCGATCCGGGCCCGAGAGTCGAACCCGAGATACGAGGCCACGGAGCTCCTTTTAACGGTGATTGATACCCTTATGGCCGGGGAGGCCCGGATCAACGACCACCTGGACTGGTACGCCATCTTGCAAGTACTCCGTTACACACAGAACATCGACTACATCGCCGCACAGTACCGCCGCCTCGCCACCCAACTCAACCCTCACCACAATCCCTTCGCCTTCGCCGCTCACGCCTTCACTCTCGTCAACGACGCCTGGACCGTCCTCTCCAACCCCACCAAAAAGGCTTTCTACGACAACCAACTCAGACTCCTCACTCAACCACCACCTCCTCCTCCGGCCCCGGTTGCCTTCTTTCCGATTCAGCCGCCGCAACCCAACCTAAATCCGAACCCCATCCCGACCCCGCTCCCTCCGGAGCCAAGCCCTAGGCTTAGGGTAGAGGTTGAGCCCCCGCCCCCGCCCCCGCCTCCGCCTCCGACGTCGTCGAGTCAGGAGGACAATGCGAGCGAGTTGACTCGAGTGAGTGAGAGCGAGACCCAAGGGGTGAGCTTCTGGACCGCGTGCCCTTACTGTTACGTTATGTACGAGTATCCGAAGCTGTACGAGGATTGTACTTTGCGGTGCCAGAGTTGTCGGAGGGGGTTTCATGCCGTGGTTGTGCGCTCGCCGCCCAAAGATGCCACTTTTGGTTCGTTTTGCAGTTGGGGTTTCTTCCCTCTGGGGTTTTCTGGGGATTTTAAGGACATTAACGGCTCTTCTTCCTCTTCCAAATGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTTTCAAGGGTGGCGAGGACAATGCCAGCTACCAGAAGGAGCCTTGGGTCTTTTACGATGATGACGTGTCTGCGGAGTTCGTGGAGGCTGGTTCCGACACCACGGAGGATGATTCCGATGACGATGACTGGCATGGCGAGAATCAGAAGGGGACATCCAAGAGAAGGAAAAGAAGGAAGAGGAGAAGCAATGTTGGTGGTGATGTTAGAAGGGTACCTCCGATTGAGAGGCCTAGAAGAGGGGTTCAGAATAGTGATGGTAATGACAATGACAATGTGGGGGATAGCGAGGCTGATGGTGCTGCTATTGCTATTGCGGCGTTGCCGGAATCTAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTTAGCAATGAGGTGGAGGAGCCTGTGCATGGAGTGGGTGAAAGGAATGGGAATGGGAATGGGAATGCTGAGGATAATATGGAAGGAATTGGGTTTTTTGAGGGACTGGATGAGTTCCTTAATAGCTTGCCTATTCTCAATGTTGTTGCTGATGATAAGGTTAAGACTTAA 1470 0.5469 MDGHGHGHGGGGNKGEAERWLYTANKVLSARDLHGARSFAIRARESNPRYEATELLLTVIDTLMAGEARINDHLDWYAILQVLRYTQNIDYIAAQYRRLATQLNPHHNPFAFAAHAFTLVNDAWTVLSNPTKKAFYDNQLRLLTQPPPPPPAPVAFFPIQPPQPNLNPNPIPTPLPPEPSPRLRVEVEPPPPPPPPPPTSSSQEDNASELTRVSESETQGVSFWTACPYCYVMYEYPKLYEDCTLRCQSCRRGFHAVVVRSPPKDATFGSFCSWGFFPLGFSGDFKDINGSSSSSKWNPFSPLFPCAFKGGEDNASYQKEPWVFYDDDVSAEFVEAGSDTTEDDSDDDDWHGENQKGTSKRRKRRKRRSNVGGDVRRVPPIERPRRGVQNSDGNDNDNVGDSEADGAAIAIAALPESRRRSERNLGKLDLNVEFSNEVEEPVHGVGERNGNGNGNAEDNMEGIGFFEGLDEFLNSLPILNVVADDKVKT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1997 489 Gene3D DnaJ domain 70 145 IPR036869 -
Aed4g1997 489 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 10 488 - -
Aed4g1997 489 SUPERFAMILY Chaperone J-domain 69 141 IPR036869 -
Aed4g1997 489 SMART dnaj_3 74 132 IPR001623 -
Aed4g1997 489 MobiDBLite consensus disorder prediction 336 402 - -
Aed4g1997 489 MobiDBLite consensus disorder prediction 151 201 - -
Aed4g1997 489 CDD DnaJ 75 129 IPR001623 -
Aed4g1997 489 ProSiteProfiles dnaJ domain profile. 75 140 IPR001623 -
Aed4g1997 489 Pfam DnaJ domain 75 137 IPR001623 -
Aed4g1997 489 MobiDBLite consensus disorder prediction 357 371 - -
Aed4g1997 489 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 10 488 - -
Aed4g1997 489 MobiDBLite consensus disorder prediction 151 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1997 Aed-Chr4 23490385 23491854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1997 16 488 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 42.020 1.79e-103 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1997 - - gmx:100778926 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2061 10 24448087 24449466 Aed4g1997 4 23490385 23491854 PCT