Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1983 ATGGCAGCTTTCCGTTCTGGTCTTGATGCAATGGGAATCATTTTCTTACTTCCTATGATTACTTTTGTAAAGCCACTTTCATTTCATTACCAAGGGTTTGAGTATGATGATGCCAGGATTGAAGGAGATGCTACTTTGTCACATTCAGAAATCCAACTCACTGCAACCACAAGGTACAAAAGCAATGCTCACAGTATTGGGAGAGTCACAAGTTTTAAGCCTTTGCACCTGTGGGATATGAGTTCAAGAAATCTCACTGACTTCACTACCAAATTTTCCTTTGTCGTTTTCTCAAATGATACTTCTAGTTTTGGAGATGGCTTGGCTTTTTTCTTTGCAGATCCAAAGCTGCCACTTTCAAATCAAATACAAGAAGGAGGTGGTCTTGGTCTTGTGGATGGACACCAATTGTTGAAGTCAACCAAACATCCATTTGTGGCAGTGGAGTTTGACACTCACCAGAATTTTTGGGACCCATATGGCATTCATGTAGGTATAAATCTCAACTCTATGAGATCTAACATAACTGCTCCATGGTCCATTAATATTTGGCAAATGGATGTTTATCATTGTGTAATTGAGTATAATGCAAGCACTCATAATTTGAACGTTTCTTTCACTGGAAACAAAATCAATGGCAAGCCAATAGAGAGTTATATCTCATACAATGTTGATTTGAGAGATTACCTACCAGAGTGGGTTATTTTGGGCTTCTCAGCTGCTACAGGATTTATGTTTGAGTTGAACACACTGCTGTCATGGTCCTTCCATTCAAGTTTACAAATTAATGACAATGAGTCAAATCAGATACCTCCAATGGAAGCCTCACCAATCCCAAATCCTATTCTTTCACCAATTCCCACTGCTAATATTAGCCCTGAACAAGAGGGAAAGGGCAATAAAGGTTTATTGAAGGGGCTAGAAGTTGGCATAGTTTTATACCTTCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAATCCAGCAACATTATGTTGGACTCAAGTTTCAATGCTAAGCTAGGGGATTTTGGCTTAGCTAGACTGGTTGATCATGAGAAAGGATCACAGACCACAATTCTAGCAGGGACAAGGGGCTACATAGCTCCTGAATATTTCACCACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTTTTGGAGTTGTTTTGTTGGAATTAGCTAGTGGAAGAAAACCAATTGACCTAAATGCAAAGGAAGGTCAAATAACCATATTTGAATGGGTTTGGGAGCTCTATAGATTGGGAAAGTTACAACATGAAGTAGTAGACTCAAAGCTTGGGGGAGCATTTGATGAGGAGCAAGTGGAACATTTAGTGATTGTTGGTCTCTGGTGTGCCAATCCAGATTATACTTCCAGGCCATCTGTAAGGCAGGTGATTCAAGTGCTTAAGTTTGAAGCTCCTTTACCAATTCTCCCACAGAAAATGCCTGAGCCAAATCACCATTCTCCAACAATGAGTGCTATTTTTGCTTCAGTTTCTTCTCCCTCTCTGACTACATACTAG 1536 0.4004 MAAFRSGLDAMGIIFLLPMITFVKPLSFHYQGFEYDDARIEGDATLSHSEIQLTATTRYKSNAHSIGRVTSFKPLHLWDMSSRNLTDFTTKFSFVVFSNDTSSFGDGLAFFFADPKLPLSNQIQEGGGLGLVDGHQLLKSTKHPFVAVEFDTHQNFWDPYGIHVGINLNSMRSNITAPWSINIWQMDVYHCVIEYNASTHNLNVSFTGNKINGKPIESYISYNVDLRDYLPEWVILGFSAATGFMFELNTLLSWSFHSSLQINDNESNQIPPMEASPIPNPILSPIPTANISPEQEGKGNKGLLKGLEVGIVLYLHEEWEQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHEKGSQTTILAGTRGYIAPEYFTTGKARKESDIYSFGVVLLELASGRKPIDLNAKEGQITIFEWVWELYRLGKLQHEVVDSKLGGAFDEEQVEHLVIVGLWCANPDYTSRPSVRQVIQVLKFEAPLPILPQKMPEPNHHSPTMSAIFASVSSPSLTTY 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1983 511 Gene3D Transferase(Phosphotransferase) domain 1 301 492 - -
Aed4g1983 511 CDD lectin_legume_LecRK_Arcelin_ConA 26 260 IPR001220 GO:0030246
Aed4g1983 511 SMART serkin_6 210 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1983 511 Gene3D - 24 273 - -
Aed4g1983 511 Pfam Protein kinase domain 313 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1983 511 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 266 IPR013320 -
Aed4g1983 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Aed4g1983 511 ProSitePatterns Legume lectins alpha-chain signature. 230 239 IPR000985 -
Aed4g1983 511 SUPERFAMILY Protein kinase-like (PK-like) 312 475 IPR011009 -
Aed4g1983 511 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Aed4g1983 511 PANTHER LECTIN RECEPTOR KINASE 14 275 - -
Aed4g1983 511 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Aed4g1983 511 PANTHER LECTIN RECEPTOR KINASE 311 509 - -
Aed4g1983 511 PANTHER - 14 275 - -
Aed4g1983 511 PANTHER - 311 509 - -
Aed4g1983 511 ProSiteProfiles Protein kinase domain profile. 35 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1983 Aed-Chr4 23403290 23405323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1983 312 492 Receptor kinase-like Gene Family AT5G10530 61.290 3.81e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aed4g1983 Lectin_legB 1e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1983 - - gmx:100814713 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1983 4 23403290 23405323 Aed10g2035 10 24284438 24286395 PCT