Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1980 ATGAGTTCCAAAGGAGTTGGTGAAGATTGCCTAGGATGGGCAGCAAGAGATGCGTCCGGAGTTCTATCACCTTACAAATTCAATCGCAGGACTCTTGGCAATGAAGATGTTCATATTAAAATTACACACTGTGGTGTTTGCTATGCCGATGTAGTTTGGACAAGGAATAAACACAATGACTCAAAGTATCCTGTTGTGCCTGGTCATGAGATTGCTGGAATTGTGACAAAGGTTGGTTCTGATGTCCACCGTTTCAATGTTGGCGACCATATTGGAGTTGGGACTTATGTCAACTCGTGTAGGGATTGTCAGTATTGTAATGACAGACAAGAAGTTCATTGTACCAAGGGAGTTTTCACTTTTAATGGTGTTGATTTTGATGGTACAATTACAAAAGGAGGATACTCCAGTTACATAGCGTTGGCTAAATCGTTGGACTTTATAATCGACACAGCATCTGGTGATCATCCGTTTGATCCTTACATGTCACTGTTGAAGACATATGGTGTTTTTGTTCTAGCTGGTTTCCCTAGTCAAGTCAAATTCAGCCCTGCAAGCCTTAATATAGGATCGAAGACTGTTGCCGGAACCATTACAGGTGGTACAAAAGATATACAGGAGATGATCGAGTTCTGTGCAGCAAACGGGATTCACCCAAATATAGAAGTGATTCCAATCGAGTATGCCAATGAAGCTCTTGAGAGGCTCATAAATAGGGACGTCAAGTACCGCTTTGTAATAGATATTGAGAACTCCCACTCCCTGAAAGAAAAATAA 777 0.4144 MSSKGVGEDCLGWAARDASGVLSPYKFNRRTLGNEDVHIKITHCGVCYADVVWTRNKHNDSKYPVVPGHEIAGIVTKVGSDVHRFNVGDHIGVGTYVNSCRDCQYCNDRQEVHCTKGVFTFNGVDFDGTITKGGYSSYIALAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLAGFPSQVKFSPASLNIGSKTVAGTITGGTKDIQEMIEFCAANGIHPNIEVIPIEYANEALERLINRDVKYRFVIDIENSHSLKEK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1980 258 Pfam Alcohol dehydrogenase GroES-like domain 35 141 IPR013154 -
Aed4g1980 258 SUPERFAMILY GroES-like 12 247 IPR011032 -
Aed4g1980 258 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Aed4g1980 258 Gene3D - 11 255 - -
Aed4g1980 258 PANTHER ALDEHYDE REDUCTASE 140 253 - -
Aed4g1980 258 PANTHER ALDEHYDE REDUCTASE 8 140 - -
Aed4g1980 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 144 217 IPR036291 -
Aed4g1980 258 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 1-RELATED 140 253 - -
Aed4g1980 258 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 1-RELATED 8 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1980 Aed-Chr4 23391052 23394715 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1980 140 252 Monolignol Biosynthesis Gene Families AT1G72680 67.257 6.34e-52 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1980 K00083 - gmx:100806165 282.337