Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1978 ATGAAGTCAACCATTAATGGGATAATATACACAGAAGCAGCAAGCTTGAGGCAACAGCTTCAGTACTTGCAAGAATGCCACAGGCAATTAATGGGTGAAGAACTTACGGGTTTGGGTATTAAAGAACTACAAAATCTGGAAAACCAACTGGAGATGAGTTTAAAGGGTGTCCGCATGAAAAAGGATCAAATTTTAACTAATGAGATTAAAGAACTACGCCAAAAGGGAAATCTCATTCATCAAGAAAACGTTGAACTCTATCAAAAGATGGAGCAGATCCAAAAGGAAAATGCAGAGCTACAAAAGAAGGTTTATGAGGCAAGGAGTACAAATGAAGAAAATGTGGCATCTAATCCTTCTTACATGGTCAGAAATGGATATGATTTACATGAACCTATCAGTCTCCAGCTAAGTCAGCCACAGTCTCAATACAGTGATCCATCAGCCAAAGCAATGAAACTCAGTAATTGGGGAGGGTTGTCATTTTGTGCCCAGCAGCCAACAAGGCAACAACTTCTCCATAGAATGATCAGGCTTCTTCGAGTTGGATCTTGTACTTCGTCAACCACATTTGTTCCACTCAACAGTACAATGCATACCACAACCACCTATGCCTATACCTTTAACAATTTGAAGGAATACCCGAGTTTCATTGCTTTGGCTGATGGTTCACTATATTAA 681 0.3965 MKSTINGIIYTEAASLRQQLQYLQECHRQLMGEELTGLGIKELQNLENQLEMSLKGVRMKKDQILTNEIKELRQKGNLIHQENVELYQKMEQIQKENAELQKKVYEARSTNEENVASNPSYMVRNGYDLHEPISLQLSQPQSQYSDPSAKAMKLSNWGGLSFCAQQPTRQQLLHRMIRLLRVGSCTSSTTFVPLNSTMHTTTTYAYTFNNLKEYPSFIALADGSLY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1978 226 ProSiteProfiles K-box domain profile. 6 96 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed4g1978 226 PANTHER MADS-BOX TRANSCRIPTION FACTOR 8 155 - -
Aed4g1978 226 Pfam K-box region 9 90 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed4g1978 226 Coils Coil 40 60 - -
Aed4g1978 226 Coils Coil 83 110 - -
Aed4g1978 226 PANTHER SERUM RESPONSE FACTOR HOMOLOG 8 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1978 Aed-Chr4 23378890 23381715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1978 12 148 MADS-box Gene Family AT2G22630 54.348 1.05e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1978 K09264 - gmx:100808145 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2032 10 24245360 24255187 Aed4g1978 4 23378890 23381715 PCT