Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1969 ATGGAGAACTACTCATACCAATCGTATCCAGATTCAGGCGAGTCCTCTCCACGCTCCAGAGAGATCGATTTCGAGAACCCACCTTCTCCATGGGACGACCAAAACTACAAAGCCAAGTTCATGTGCAGCTACGGCGGCAAGATCCAGCCACGCTCCCACGACAGTCAGCTATCCTACGTCGGCGGCGAAACCAAAATCCTCGCCGTCGACCGCACCACCAAGTTCCCCGCCATGCTCGCCAAACTCTCCGCCCTCTGCGACGCCGCCACTCCCCAAGACAATAACAGCCTCACCTTTAAGTACCAGCTCCCCGGCGAAGACCTCGACGCCCTCATCTCTGTCACCAACGACGACGACCTCGACCACATGATGCACGAGTATGATCGCCTCTACCGCGCTTCCGCTAGACCCTCCCGCATGCGATTGTTCCTCTTTCCCTCCGATAATACTCTTCCTCCTTCGCCTCCTGCTTCTGCCCCGCCAGAACCGGTTAAGCCTAACAACGTCGATTTCCTTTTCGGTCTCGACAAAAACGTCGCCGTCGCTGCTCCTCCGCCTCCTCAGCCACTGCCTGCAACGCTCAAATTTAATGATCCTGTGCTGGATCCCGTGGCGCCGTCACCGGAGTACCAGTCGCGACTGAATTTGAACCCTGCCGATCGTGTTGCGGTTACGGATCCCAACGCGATTCTTCAGCGCCAGTTGCAGCAACTGCAACTTGCGGAGAACGAGCAAGCTGCATATCGCAGAAAGAGCGAGGATAATAATTTCCCCGCTGGTGATTATTACGTTCAGAAGATGCCGGAGAAGTTCCCGCAGGCGAATTTTCAGGCGAACGCGCCGGGTTATTGGCCTGAAAAACAAGTTTCCGGCGAGTTTTATCCACCGGTGGGGTCGGCTGCGTCCGGCGGAGGGGAACAGCCGGTTTATATGATTCCGGCGCCGGGGACGTTTTATCATGCACCAGTTATGCGGCCCCCGGCCTCTCAGGGATACTACGCCGTGCAACGAATGGGTTCTGATAATTACCGTGAAGCGCCGGTGTACGGCGGCGTGCCGCCTCCTAAAGTGGCGGTTCCGGCTCAGCAGCCGGTTAAGGCTCCCGCGTATACGGAAGGATTCGGTGTGGTTCGGCAAGGTGGGATAGTGGATAATACGGGTGCTCCATACGCGCAGGTGGCGTACGATAGTGCGAGTGGGAGACAGGTCTATTATACTGCGCCGGGTGGTGGTGGTGTAGTGCACGCTCCTCCGTACCAGGGGGGTTTTCCACCCGTAACCGCTGACATGAGACAAGGTGGGGTGTCGTTGGGTCAGGATGTTAAAGCCATAAGCAGGGTTACTCAAGGTTCAGTGTGA 1359 0.5695 MENYSYQSYPDSGESSPRSREIDFENPPSPWDDQNYKAKFMCSYGGKIQPRSHDSQLSYVGGETKILAVDRTTKFPAMLAKLSALCDAATPQDNNSLTFKYQLPGEDLDALISVTNDDDLDHMMHEYDRLYRASARPSRMRLFLFPSDNTLPPSPPASAPPEPVKPNNVDFLFGLDKNVAVAAPPPPQPLPATLKFNDPVLDPVAPSPEYQSRLNLNPADRVAVTDPNAILQRQLQQLQLAENEQAAYRRKSEDNNFPAGDYYVQKMPEKFPQANFQANAPGYWPEKQVSGEFYPPVGSAASGGGEQPVYMIPAPGTFYHAPVMRPPASQGYYAVQRMGSDNYREAPVYGGVPPPKVAVPAQQPVKAPAYTEGFGVVRQGGIVDNTGAPYAQVAYDSASGRQVYYTAPGGGGVVHAPPYQGGFPPVTADMRQGGVSLGQDVKAISRVTQGSV 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1969 452 PANTHER OS05G0427100 PROTEIN-RELATED 1 445 - -
Aed4g1969 452 CDD PB1_UP2 41 145 - -
Aed4g1969 452 MobiDBLite consensus disorder prediction 1 15 - -
Aed4g1969 452 Gene3D - 58 147 - -
Aed4g1969 452 SMART PB1_new 52 147 IPR000270 GO:0005515
Aed4g1969 452 Pfam PB1 domain 54 146 IPR000270 GO:0005515
Aed4g1969 452 MobiDBLite consensus disorder prediction 1 32 - -
Aed4g1969 452 Coils Coil 231 251 - -
Aed4g1969 452 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 445 - -
Aed4g1969 452 SUPERFAMILY CAD & PB1 domains 53 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1969 Aed-Chr4 23327457 23328815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1969 32 147 MAP Kinase Kinase Kinase AT5G57610 43.966 6.42e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1969 - - gmx:100780332 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2027 10 24217839 24219266 Aed4g1969 4 23327457 23328815 PCT