Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1947 ATGTCTACAAAAATGAAGCCTACCACAAGAAATTATAATGTTCTCCCTATTTTCTTGGGGTCATTATTCTGTCTCTTTATGGCGGGTTTGGGTGCTGAAAGTGACGTCTATTGCTTGCAAACCATCAAGAAATTGGATCAGTTTAATCACTTATCTAGCTGGTATTTCGAGAGCAACACTGAAGGTGACATATGTAGATTTAGCGGTGTTGAATGCTGGAATCACGTGCAAGCTGGTAGAGTAATCAGTCTCAGCCTATCTAACAAGGGGCTGAAGGGCCAGTTTCCTAGTTGCGTTGAAAATTTCACATGGTTGCAGATTCTGAACCTCTCACACAACCAGTTTTCTGGATATATTCCATCTGATATATCAACCAGGCTCTCATATCTGACCTCACTCGATCTCTCAAATAACAACTTCTATGGTGAAATTCCAAAGGGTATTGCTGATTTGTCACGCTTAATTACCCTTCGACTTGATAGCAATCAATTAAGTGGCCAAATCCCACAAGAACTTGGGTTGCTTCCCTGGCTTAGAGATTTTAGTGTTGCTAACAACTTGTTAGAAGGGCCAGTAGTGCCTGTTTTTGTCAGTAAAGTAGTTAATGTGAGTTTGAGCTATGCCAATAATAGTGGACTCTGTGGAGAAGCACTAGGAAGCTGTGATGAAAGCTTGTTTGGTATATCGTTTTGGTATAGTTTTATTATTGGTTTCGTTTCTTCAGCAACTTCTGTCCTAGTATCTTTCGTGTTCTATTATGCACCTTGGACAAAATTCAAGAAGATCAGGAGGAGTAACGCTATTCATCCCTTAATGAAAAATCAGAACCATCAAAAGAACACTAGACAAGAAGCTGAACTGCTACCACTGGCCATGCAAGAGCAAGGAAGCAAAGAGCTGTCAAGATTGTTGGAGAGATTGATTTCTAGAATGAACTTCATGGAATTATGCAAGGCAACTGATTACTTTAGCACAAATAACGTGTTGGGGGTAGGAACGACAGGGATTACGTACAAGGCAAAGATATCAAATAATTGTTTTCTGGCGGTTAAGAGGCTATATGATGCTGATGAGTACAAGAGGGAATTCTTACTTGAAACAATGATTCCGGGGAGACACAGGCACAAAAATATAGCTCCACTGCTTGGATTCTGCATAGAAAAAAGAGAAAGGATTTTGGTGTATAAGTACATGTCGAATGGAAGGCTCAGTGATTGGCTACAATGTTCTGATGAGGATCATCATCTAACAATAAAATTAGAATGGCCAGAGAGGATTCACATTGCACTTGGTATTGCCTGTGGTTTATCTTGGCTCCACAAAAGGTGCAAGATATTCCATCTTAATTTAGATTCAGAGTGTGTCTTCCTGGACAAGAACTTTGAGCCAAAAATTTCGAATTTTGGCAAGGCAAAATTCCTGAACCAAACAGTTGAAGATCATGTGAGGATGAAATTGTTTTTGATTGATGAACTTGGGGTGAAGGGTTCTGTTGAGAAGGATGTGTATGACTTTGGAATAATCCTTTTTGAGCTTATAACAGGGAAAAGATTAAGTTCAACGACTGATTCTTCTGACAGTGTTAATGGCAAGTTGATGAACTATATAAGCAATAACTTGTTCACTGGCCCTGAGGATTTTTATGATTCCATTGACGAATGTATCATTGGGAAGGGTTTTGATGATAAAATCCTTCGTCTCCTCGAAGTTGCATGTGACTGTACTGTTAAGGGACGTTCTTTAAAGCAAAGGCCAAAGATGGTTGATATACACAAAACTATAAGAGCCATGTGGGAGAGCTGGTTTGATTCTGAAAGGCTGAACCTGTCTATGGGTTGTCCTGACCATAGAACATGCATTAGTGAAATAGAATGTATTTGTTGA 1884 0.3944 MSTKMKPTTRNYNVLPIFLGSLFCLFMAGLGAESDVYCLQTIKKLDQFNHLSSWYFESNTEGDICRFSGVECWNHVQAGRVISLSLSNKGLKGQFPSCVENFTWLQILNLSHNQFSGYIPSDISTRLSYLTSLDLSNNNFYGEIPKGIADLSRLITLRLDSNQLSGQIPQELGLLPWLRDFSVANNLLEGPVVPVFVSKVVNVSLSYANNSGLCGEALGSCDESLFGISFWYSFIIGFVSSATSVLVSFVFYYAPWTKFKKIRRSNAIHPLMKNQNHQKNTRQEAELLPLAMQEQGSKELSRLLERLISRMNFMELCKATDYFSTNNVLGVGTTGITYKAKISNNCFLAVKRLYDADEYKREFLLETMIPGRHRHKNIAPLLGFCIEKRERILVYKYMSNGRLSDWLQCSDEDHHLTIKLEWPERIHIALGIACGLSWLHKRCKIFHLNLDSECVFLDKNFEPKISNFGKAKFLNQTVEDHVRMKLFLIDELGVKGSVEKDVYDFGIILFELITGKRLSSTTDSSDSVNGKLMNYISNNLFTGPEDFYDSIDECIIGKGFDDKILRLLEVACDCTVKGRSLKQRPKMVDIHKTIRAMWESWFDSERLNLSMGCPDHRTCISEIECIC 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1947 627 Gene3D Transferase(Phosphotransferase) domain 1 398 608 - -
Aed4g1947 627 Gene3D Ribonuclease Inhibitor 38 221 IPR032675 -
Aed4g1947 627 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Aed4g1947 627 SUPERFAMILY Protein kinase-like (PK-like) 302 603 IPR011009 -
Aed4g1947 627 SUPERFAMILY L domain-like 61 246 - -
Aed4g1947 627 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Aed4g1947 627 PANTHER RECEPTOR-LIKE PROTEIN 55 14 598 - -
Aed4g1947 627 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 14 598 - -
Aed4g1947 627 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Aed4g1947 627 Pfam Protein kinase domain 324 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1947 627 ProSiteProfiles Protein kinase domain profile. 323 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1947 Aed-Chr4 23203990 23206132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1947 9 599 Receptor kinase-like Gene Family AT3G28450 33.934 9.02e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Aed4g1947 Pkinase 3.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1947 - - gmx:106795644 1046.57