Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1941 ATGGAACTGGGGTCTGTCTTAGACCCTGGAAGGCCTCTCAAAATGGACAAGGCTGTTATATTAAGCGATGCAGTTCGAGTGGCTGAGAAAAATGAGCTTCGCGATGAGAAGCAGCGACTAAAAGCAGAGAAAGAAAACCTTGAGCAGAAAGTTAAAGGCTTGAGTTCACAACCTAGCTTTCTGCCTGCATTTCCTGCAGCAGGACAAGTTGTTGGCAGCAAGCTGGTGCCCTTCATGGGCTACCCAGGAGTTTCCATGTGGCAGTATTTACCACCTGCTGCTGTTGATACCTCACAGGACCATGTACTCAGACCCCCAGTTGCATAA 327 0.4862 MELGSVLDPGRPLKMDKAVILSDAVRVAEKNELRDEKQRLKAEKENLEQKVKGLSSQPSFLPAFPAAGQVVGSKLVPFMGYPGVSMWQYLPPAAVDTSQDHVLRPPVA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1941 108 PANTHER BHLH TRANSCRIPTION FACTOR 28 108 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aed4g1941 108 PANTHER BHLH TRANSCRIPTION FACTOR 1 27 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Aed4g1941 108 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 28 108 - -
Aed4g1941 108 PANTHER TRANSCRIPTION FACTOR ILR3-LIKE 1 27 - -
Aed4g1941 108 Coils Coil 26 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1941 Aed-Chr4 23190291 23190996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1941 1 108 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 53.147 3.38e-43 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1941 - - gmx:100808803 176.022