Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1939 ATGGCTTCCCGCATGGAGAACAGGCCTCCTCGCACCCTCTCCAATAAAAAAGGAGCCTCTGAAGAAGTTTTCTCCGACAAGCGTCGAAGGATTGGATCAGAGAGGATGGAGCGACAGGGCGGCCGAGGCAGGGCTCCCTTGGGTGCTCTAAAGGCAGATCCAAATGATGCTGCCAGCACCGAGGGCTCCGAATGCACCACTGTTGTTGAGTTCACCAAAGAGGAGGTAGAGGTGTTGCTGAACGAGAAGACCAATACGAAGGAGAATCGCTATGATAACAAGCTTATTGGAGCGAGTGGTTTAATTTGGCAGAAAAAAATGGACCAGATGGGGGATCTCATTAAACGACTTAAACTCTGCGTTCGATGGTTTAAGAGAGTTGAAGAAGGCTATATCCAAGAGAAAGAGAAGCTTCAGACTGACCTACAATCTGCTGAGAAGAAATGCATTGATACTGAGAATGAGATGAAGATTAAGATTGCAGAGTTGAATGAGACTATATCTAATTTGAGGGCTAGAATTTCCTCTCTAGAAGAGAGAATTGCAAAGGAAGAGTCAGATAAATTGGAAGCTATTGCTTGTTATAGAAAAGAACAGGAAGCCAGAAGTGCAGCTGAGCAGATGCAAGCCTCTGTTTCAAAAACGCTTGAGAGAGTTCGGGAAGAGAAATCAACTGCTGAGAGGAAGGCCATTTCAAATGAGGACTTGTACAAAAGATCACAAGAGTATAATATGAGTCTGCAACAGTACAATAGTCGCCTTCAGTCGGATCTTGAAATAACTAATGAGGTACATAAACGACTGGAGACGGAGAAAGCAACCATTGTTGAAAACCTTAGCAATGTGAGAGGCCACAACAAGGCATTGCAGGATCAGTTGACATCTCTAAAAGCTTCACAGGATGAGGCTGCAAAGCAGAAAGAAATGTTAGCAAATGAACTCAAATGCCTACGGGAAGAATTAAAACAAATTAGAGATGATCGAGATCGGCAACAGCTACAAGTACAAGCTTTGACTGGGGAAGTAGAAAAATACAAGGAATATACAGGGAAATCATGTGCGCAGTTGGATACCTTGACGATTAAAACAAATGCTCTTGAGGAGACATGTTCTTCTCAAAGGGACCAAATAAATATGCTGCAACAGCAGTTGATTGCTGAAAAGGAGAAGTCAAAGATGGCTGATTTATCTGTCTCAGAAACAAGAACAGTTTTTGAAGATCAGAAAAGAATTATATCTGAACTCCAGGAACGACTGGCAGAGAAAGAATTCCAAGTACTTGAAGGGGAGAAGTTAAGGAAAAAATTGCATAATACTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGTCCTTTGCTACCTGATGATGGTCCTGGAACAGACATGGTTGTTTCGTATCCCACGTCAACAGAAGCTCTTGGCCGGGGGCAGAAGTACCCATTTACGTTTGACAAGGTATTTAATCACGAGGCTTCTCAGCAAGATGTTTTCACTGAAATATCACAGCTGGTACAAAGTGCGCTTGATGGGTACAAGGTATGTATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTATACAATGATGGGTAGGCCGGATGCCCCTGATCTGAAGGGGTTGATACCTCGTTCTCTACAACAGATATTTGAGATTAGTCAGTCCCTGAAGGATCAGGGGTGGACGTTCAAAATGCAGGCTTCAGTATTGGAAATATATAACGAGACCATCAGGGATTTGTTATCATCAAATCGGTCAAGTGGTATTGACTCAACACGAACAGAAAACGGTGTTCCTGTTTCTGGAAAGCAGCCATACACTATTATGCACGATGTCAACGGAAACACACATGTTTCAGACCTTACTATTAGGAACGTTTCTAGTGCAAGTGAGATTTCATCCCTTCTGCAACAGGCAGCACAAAGCAGTGAAAGACTGTCGAGGAGTGGGGCAACCGGGGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTCTCCTCTCTGAGTGATGTAATATTTGCTTTGGCAAAGAAACAGGAGCATGTACCCTTTAGGAATTCAAAATTGACATACCTTCTCCAGCCATGTCTTGGTGGGGATTCGAAAACATTGATGTTTGTGAACATCTCTCCTGATCCATCTTCAACTGGAGAGTCACTTTGCTCTCTTCGTTTTGCCGCTGGAGTCAATGCCTGTGAGATTGGTATTCCGCGGCGTCAGACATCCACGCGCTCCTTTGATTCTCGTTTGAGCAGCGGCTAA 2277 0.4392 MASRMENRPPRTLSNKKGASEEVFSDKRRRIGSERMERQGGRGRAPLGALKADPNDAASTEGSECTTVVEFTKEEVEVLLNEKTNTKENRYDNKLIGASGLIWQKKMDQMGDLIKRLKLCVRWFKRVEEGYIQEKEKLQTDLQSAEKKCIDTENEMKIKIAELNETISNLRARISSLEERIAKEESDKLEAIACYRKEQEARSAAEQMQASVSKTLERVREEKSTAERKAISNEDLYKRSQEYNMSLQQYNSRLQSDLEITNEVHKRLETEKATIVENLSNVRGHNKALQDQLTSLKASQDEAAKQKEMLANELKCLREELKQIRDDRDRQQLQVQALTGEVEKYKEYTGKSCAQLDTLTIKTNALEETCSSQRDQINMLQQQLIAEKEKSKMADLSVSETRTVFEDQKRIISELQERLAEKEFQVLEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDGPGTDMVVSYPTSTEALGRGQKYPFTFDKVFNHEASQQDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLQQIFEISQSLKDQGWTFKMQASVLEIYNETIRDLLSSNRSSGIDSTRTENGVPVSGKQPYTIMHDVNGNTHVSDLTIRNVSSASEISSLLQQAAQSSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKQEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSTGESLCSLRFAAGVNACEIGIPRRQTSTRSFDSRLSSG 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1939 758 Coils Coil 69 89 - -
Aed4g1939 758 PRINTS Kinesin heavy chain signature 638 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 PRINTS Kinesin heavy chain signature 514 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 736 IPR027417 -
Aed4g1939 758 MobiDBLite consensus disorder prediction 20 41 - -
Aed4g1939 758 SMART kinesin_4 444 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 Coils Coil 363 383 - -
Aed4g1939 758 Coils Coil 251 271 - -
Aed4g1939 758 PANTHER KINESIN-LIKE PROTEIN 35 646 - -
Aed4g1939 758 Gene3D Kinesin motor domain 386 645 IPR036961 -
Aed4g1939 758 PANTHER KINESIN-LIKE PROTEIN 647 758 - -
Aed4g1939 758 Coils Coil 405 425 - -
Aed4g1939 758 ProSiteProfiles Kinesin motor domain profile. 446 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 MobiDBLite consensus disorder prediction 1 63 - -
Aed4g1939 758 PANTHER KINESIN-LIKE PROTEIN KLP-3 35 646 - -
Aed4g1939 758 Coils Coil 286 341 - -
Aed4g1939 758 Gene3D Kinesin motor domain 646 755 IPR036961 -
Aed4g1939 758 PANTHER KINESIN-LIKE PROTEIN KLP-3 647 758 - -
Aed4g1939 758 Coils Coil 128 187 - -
Aed4g1939 758 Pfam Kinesin motor domain 646 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed4g1939 758 Pfam Microtubule binding 428 585 IPR031852 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1939 Aed-Chr4 23180856 23186576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1939 355 749 Calmodulin-binding Proteins AT5G65930 34.943 1.07e-58 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1939 K10405 - gmx:100808278 1316.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1999 10 24039558 24045718 Aed4g1939 4 23180856 23186576 PCT