Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1938 ATGGCACAGAAACAGAAGTTGAGGCCTTCTCCTCTGGATGAGCCACCCACCGCTTCCTCTTCCGATTCCGGGGAAGAAGAGCAACAACCCCGACGCCAACCATCCTCTCAGCACGAAGAAGAAGAGGTTTCCTCTGCTGAAGAGGAAGGAGAAGAAGCTTCCTCCTCCTCCGAAGAAGAAGATGAGGATCTCCCACCACCCGTTGTCTCCAAAACCCCCCCTCCACCGCCTCCCACCAACCCTAACCCTATCCCTAACCCACAACCATCTTCTTCTGACTCCGAAACCGATTCTGGATCCGAGACAGAATCCGAACCCGAACCCACTCCCGTCAAGGTTAAACCATTAGCTTCTAAGCCCATGGACCAGCCCCCAAAGCCCAAGCCACAGCCCTCCCCGGCTCCGTCCCCGGCCCCGGCCCAGCCCAAATCGGCATCAAAGCGCGCCGCCGATAGCATCAAAGCCCGTGCAGCCGACCCCAAACGCGCTAAAAACAAAGCCACCGATTCCACCTCCGGCGCCGCTGCTGCCGGCGCTTCCGACGACGAGATGGAGGAGGACGGAAAGAAGCCGAGTGATCAGTCGAAGAGGTTTCAAAGGCTGTGGACCGAGGAGCACGAAGTGTCCATTATGAAGGGCATGCTTGAGTACACTTCAAAAACAGGGCTTGACCCTCTCAAGGTCCCCAATACCAACGCTTTCTGCGATTTAATGAAGAAGTCACTTCATTTTGAATTTTCCAGCAATCAGCTGAGGGAGAAGATCCGAAGGATCAGGAAGAAGTTTGAGCCGTATGGATTGAAAGAGAAGAACGGAGAGGCCCTCGTATTTTCCAAACCACAAGATCAGAAAGCGTATGAATTTTGGAGAAAGCTTTGGGGAACTGAGGATAGCCTCGTTGCCAATGGGACCCTGGATAAGCCCAAGTCTAATGGAAATGCTGCCAAGGCTCCAAAGAAGAAGGAAACCGTTAGCAGGAGTAAGAAACCCAAACCTGAAACCAAACCGGACCATGTTCCCTTGGATTCTGAGAAGTTGATGCAGATTGATCAAAAGCCTGATAGTGGTGATGCAACTTTGTTTTTGCGCGAGCTTGCTCGATTTAAAGAGGGTGTGGGTGGCTGTAAGATGGATGAGGATGATGTGAAGTGGGGGTTGGAGTTGATTGGAGAATCAAAGAGGGCAGAGTTGAGGGGTAGGTGGAAGAAATTGCAACATGCTGAGATGGAACTGTTTGCCAATCGCTCACAACTCATTGGGGAGCAGTCTAAGTTGATACTTGAGGCTCTTCGCTCATCCAACCATTAG 1308 0.5206 MAQKQKLRPSPLDEPPTASSSDSGEEEQQPRRQPSSQHEEEEVSSAEEEGEEASSSSEEEDEDLPPPVVSKTPPPPPPTNPNPIPNPQPSSSDSETDSGSETESEPEPTPVKVKPLASKPMDQPPKPKPQPSPAPSPAPAQPKSASKRAADSIKARAADPKRAKNKATDSTSGAAAAGASDDEMEEDGKKPSDQSKRFQRLWTEEHEVSIMKGMLEYTSKTGLDPLKVPNTNAFCDLMKKSLHFEFSSNQLREKIRRIRKKFEPYGLKEKNGEALVFSKPQDQKAYEFWRKLWGTEDSLVANGTLDKPKSNGNAAKAPKKKETVSRSKKPKPETKPDHVPLDSEKLMQIDQKPDSGDATLFLRELARFKEGVGGCKMDEDDVKWGLELIGESKRAELRGRWKKLQHAEMELFANRSQLIGEQSKLILEALRSSNH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1938 435 MobiDBLite consensus disorder prediction 42 63 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 1 201 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 182 201 - -
Aed4g1938 435 PANTHER STOREKEEPER PROTEIN-LIKE 11 434 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 302 342 - -
Aed4g1938 435 Pfam Protein of unknown function, DUF573 198 294 IPR007592 GO:0006355
Aed4g1938 435 MobiDBLite consensus disorder prediction 149 166 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 67 88 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 120 140 - -
Aed4g1938 435 MobiDBLite consensus disorder prediction 25 41 - -
Aed4g1938 435 PANTHER BNAANNG10740D PROTEIN-RELATED 11 434 IPR007592 GO:0006355
Aed4g1938 435 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1938 Aed-Chr4 23176034 23177341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1938 53 433 GeBP Transcription Factor Family AT1G11510 27.297 2.47e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Aed4g1938 DUF573 1.1e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1938 - - gmx:100791520 454.907