Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1936 ATGCTTGAGGCTTGGCTTTCTCTCAAGAACACACTTCAATGCAAACCACAGCCAAATCAAGTTCATGATCCAAAGACTATTTCTATTAGGCAGCAAAAGGGTAATCAGAGAACAAAGTCCAGTAATGTCAAAGATTTCATCCAAGGAAGCAAGAGGCACTTAAAAAATTCTCAAAGTTTTAGAGGAGGGGACATTGACATCAGTAGTCCCATAAACCATGAAATTGTTCTTGATAGCTCAAACAATGAAACTTGTCCATGTTGTCCTTGTCCTCAAAGCAATAGCAGCGGTAATCATAGAACACCAAGGTCAGCTACATCTTCAAAGAGAACATATACTGTTGATCACAATGAAGCAAGTTTCTCCTCCAACACAAGGTCCACGTTGGTTCAGACGGATTCTGATGGTTCTTCAACTTTGACATGCCATAAATGTGGCGACAATTTTAAACACCTTGATGCTGTAGAAGCACACCACATCTCCGATCATTCAGTTACTCAACTTGAAGAAGATTCAACTAGACAGATTATAGAAACAATATGTGGAAGTGGAACAAGCTCTATTAGTAATTCTGAAAACATGTTGGGGCAGATTGATAGCATTTTAAAGGTTTCGAACGTACCAAAAACCTTTGCTTGCTTTGAGGAATATAGAGAAAAGGTGAAGGATAAGGCTGAGAAGCTACAAAAGAAGCACCCCCGTTGTGTGGTTGATGGAAATGAGCTTTTAAGGTTCCATGGGACAACTATTGCATGTTCTCTTGGCACAAACAGTTCTTACAGCTTGTGCAGTTTGGACTATTGTGGTGTGTGTCAAATTCTGAGACATGGGTTCTCCAGCAACAAGGAATTCAAGGGGTCACAGGGGGTTTACACCACTTCCACAAGTGGGAAAGCCTTTGAATCCATTTCCATTATGACATCCCATGACCATGAGAGAGCATCTCCAAGAAAGTCTGTGATAGTGTGCAGAGTAATAGCTGGGAGAATTTATAGTCCTCAACCTCATGAAGAAAAGGTTGGTTCAGAGTTTGATTCATTGGCAGAAAAAATAAATGGCCATTCAGATGTTGAGGAACTCTACGTGTTAAATCCCAAAGCCTTGCTCCCTTGCTTTGTGGTAATCTACAAAGCCAAGAATAGGAGGTTCGGCTCAAGCTTAAGAATAAGTAGCTATTAA 1179 0.4054 MLEAWLSLKNTLQCKPQPNQVHDPKTISIRQQKGNQRTKSSNVKDFIQGSKRHLKNSQSFRGGDIDISSPINHEIVLDSSNNETCPCCPCPQSNSSGNHRTPRSATSSKRTYTVDHNEASFSSNTRSTLVQTDSDGSSTLTCHKCGDNFKHLDAVEAHHISDHSVTQLEEDSTRQIIETICGSGTSSISNSENMLGQIDSILKVSNVPKTFACFEEYREKVKDKAEKLQKKHPRCVVDGNELLRFHGTTIACSLGTNSSYSLCSLDYCGVCQILRHGFSSNKEFKGSQGVYTTSTSGKAFESISIMTSHDHERASPRKSVIVCRVIAGRIYSPQPHEEKVGSEFDSLAEKINGHSDVEELYVLNPKALLPCFVVIYKAKNRRFGSSLRISSY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1936 392 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 378 - -
Aed4g1936 392 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 378 - -
Aed4g1936 392 SUPERFAMILY ADP-ribosylation 169 378 - -
Aed4g1936 392 MobiDBLite consensus disorder prediction 29 45 - -
Aed4g1936 392 MobiDBLite consensus disorder prediction 29 66 - -
Aed4g1936 392 MobiDBLite consensus disorder prediction 91 133 - -
Aed4g1936 392 ProSitePatterns Zinc finger C2H2 type domain signature. 142 163 IPR013087 -
Aed4g1936 392 Gene3D - 157 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1936 Aed-Chr4 23167981 23169406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1936 4 377 C2H2 Transcription Factor Family AT5G54630 40.919 8.08e-98 298